Cyprinodon variegatus (sheepshead minnow): 107088920
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Entry
107088920 CDS
T06110
Name
(RefSeq) cadherin-5-like
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04514
Cell adhesion molecules
cvg04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107088920
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107088920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107088920
04090 CD molecules [BR:
cvg04090
]
107088920
Cell adhesion molecules [BR:
cvg04515
]
Cadherins
Major cadherins
107088920
CD molecules [BR:
cvg04090
]
Proteins
107088920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_3
Cadherin_4
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
107088920
NCBI-ProteinID:
XP_015236871
Ensembl:
ENSCVAG00000005882
UniProt:
A0A3Q2GCP8
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MAWLQVWTTGLIVPLLNFVAFAQDSGLSGVVPERPQSDIIVKKESYPLLRRQKREWLWNS
LYVIEENPVQFPFQIGQLKSSKQVAVKSFTIEGEGANTIFTVNKKGGELYVNTLLDREEK
AQYHLTAKMYDGNEVLVESAGDFIVQVTDINDNCPVFSKEYKGSVVERKKGTVFEVTATD
KDDPTTVNAMLQYSLTRDAETWDLFEIHPISGMITSKTTSLDREKKSQYVLRVEARDMNG
RPSGCLNTTTVPITITDINDNMASFSNRKYEISVKENHKLDEEIGKLTVMDRDEPENKQP
LFSILSDGGKTFNAKPDQNKDCILVLKQALDYETRTSYTFTVKLEEVLHSLPADNINEAI
TSAQVTIRVMDVDEPPIFNSYNYSFSVYEEQLESTLLGKIQARDPDRANKRIEYSIPETG
LPFSIHPFSGELSLLRKLDRETKKEHTFAVKAQEQNSDLQSLVNITINVLDINDNPPELI
VDDIYVCENDVTNTVIGRLEALDKDDQQATFTYSLLPNSNFSLKDNGDGTSNLLVKKGPF
NLEDSSDYSVEVSVSDGGLPPLSSVTKVQIKSCQCDANRVYSKCKASKLRMGVSVHALIA
ILLCILTILVIVILFVMRKHYQKDSLASLKNIGEIHEQLVTYDEEGGGEMDTNGYDVSIL
TSACNDGSLLRHPDRFSHPSMYAMVQKPPHHSQPTACKGDMAAMIEMKKDEADHDRDGFP
YDTLHIYGYEGPESLAGSLSSLESSSSGSNLDYDFLNDWGPRFKALAELYGVDGADYYHQ
Y
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggctccaggtatggacaactggactcatcgtccctcttctcaactttgtcgcc
tttgctcaagactctggcctttctggggtggtaccagaaagaccacaatcagacataatt
gtgaagaaagaatcctatccgctgctgcgcagacagaagagagaatggttgtggaactcc
ctttatgtgatagaagagaaccctgtacaattcccctttcagataggacagcttaagtcc
agcaagcaagtggcggtgaagtcgtttacaatagaaggcgaaggagcaaacaccatcttc
acggtcaacaagaaaggaggcgaactctatgtcaacactcttctagacagagaggagaaa
gctcagtatcatttgacggctaagatgtacgatggaaacgaggtgttggtagagagcgcc
ggggactttattgtccaagtgacggatatcaacgacaactgccccgttttttcaaaggaa
tacaaaggatctgttgtggagcgaaagaaggggactgtgtttgaggtgacggcgactgat
aaagatgatccgaccactgtcaatgcaatgcttcagtactctctaaccagagatgcagag
acttgggatctctttgaaatccacccaatttcaggtatgatcacctccaagacaactagc
ctggaccgggagaaaaagagtcagtatgtgctgagggtggaagcgagggacatgaatgga
aggccctctggctgcctcaacaccaccacggtccccatcaccatcacagacatcaatgac
aacatggcatctttcagcaataggaaatatgagatcagtgtgaaagaaaaccataaactt
gacgaggagatcggcaaactgacagtcatggatagagatgagcctgagaacaagcaaccc
ctattctccatcttaagtgacggtgggaaaacattcaacgctaaacctgatcagaataag
gactgcatcctggtgctcaaacaggctttagactatgaaacacggactagctacactttt
actgtgaagttggaggaagtgctgcactcccttcccgcagacaatattaacgaagcaatc
acatcagcacaggttaccatcagggtgatggatgtcgacgagccgccgatttttaactct
tacaactatagcttcagtgtctacgaggagcagctagagagcacattattaggaaaaatc
caggccagagaccccgacagagccaacaagcgcatagagtactccattccagagacaggc
ttacccttcagcatccacccattcagcggtgagttatcccttctgagaaagctggacaga
gagacgaagaaagaacacacgtttgcagttaaagcgcaggaacagaacagcgatttgcag
tcactggtgaacattaccataaatgttctggacattaacgataacccgcctgaactgatt
gtggatgacatctacgtgtgtgagaatgacgtcacaaacacagtaattggtagattggaa
gccttagacaaggatgatcaacaagctaccttcacttacagtctacttccaaactccaac
ttctccctcaaagacaacggagacggcacatccaatttactggtgaaaaaaggacctttc
aacctggaggactccagtgattacagtgtggaggtgagcgtcagtgacggaggtctgcct
ccgttgagcagcgtcaccaaagtgcagataaagtcatgccagtgtgatgctaatcgagtt
tattcaaagtgcaaggccagtaaactgaggatgggagtcagtgtccatgccctgatagca
atacttctttgcatactgaccattctggtaatagtgatcctgtttgtgatgaggaaacac
tatcagaaggattctctcgccagtttgaagaacatcggtgaaatccatgagcagctggtc
acatatgatgaggaaggagggggagagatggacaccaatggctacgatgtctcaattctc
acttcggcgtgtaacgatggatcccttctccgccatcctgaccgcttctcacacccttcc
atgtatgccatggtccagaaaccgcctcaccactctcagcccaccgcatgcaaaggcgac
atggcggcaatgattgagatgaaaaaagacgaagctgaccacgacagagacggattccca
tacgacactctccacatctatggctacgagggacctgaatctttagcgggaagccttagt
tctctggaaagctcctcttctggttcaaacttggattacgactttctcaatgattggggg
ccgaggttcaaggccctggccgagctgtatggcgtggatggtgctgactactaccatcaa
tactga
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