Cyprinodon variegatus (sheepshead minnow): 107088943
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Entry
107088943 CDS
T06110
Symbol
sec24c
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107088943 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107088943 (sec24c)
Membrane trafficking [BR:
cvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107088943 (sec24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
107088943
NCBI-ProteinID:
XP_015236900
Ensembl:
ENSCVAG00000021547
UniProt:
A0A3Q2DGV4
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MNVNQHTPMASPYGQPQPGYGQPSYAPQDGGYPGPYSPYNGPASAHQPGVPPQGYSPFTS
FPSKAVAANPVSDLSSPLDLGPTRLPPTSAPPPASAPQPYNQYTHSQGDMQNGPPPMTQA
PPRPAAAQPYTQGHVNMSGSLPSYPQHYGPPPSMQQVTNQMTGMQITPGPPTSAGPGYVP
PHSSQPPLSTAYSAAAQPSYTQAPPPASSAPTQPPPASGPAASQQYYGGPPPSSQQPFNS
SLPPTSQQQFTSSVPPPPSQQSFPPSSFSGPAPPPTRPQGPPMSQSQPQMPFPSQPPFSA
PPPVSQPGFAGGPPPPVQGSFPPQPTQPSSQPGSFPPPGPPPTSATSGQYTTSMAQQPPP
PTQPSPYHSGPPPPRVQMPPTSMGQSNHMPPGPPGPLQQPPAQPGMQTGFPPQQNGAFGQ
VRGPQPGYAGPYPGQPNYGAQAPAPAPSAQKRLDPDAIPSPQASDMPAVQKSRHRIDPDA
IPSPIQVIEDDKAKSTEPFTTGVRGQAPPLVTTNFQVKDQGNASPRFIRCTAYNMPCTSD
MAKQSQVPLAAVIKPLATLPPDETPPYMVDHGEAGPIRCNRCKAYMCPYMQFIEGGRRFQ
CGFCSCVTEVPPQYFQHLDHTGKRVDCYDRPELSLGTYEFLATVDYCKNNKLPQPPAFIF
LIDVSYNAVKSGLVSLICNELKTLLDLLPRENPEMDSVVRVGFVTYNKVLHFYNVKPTLA
QPQMLVVSDVSDMFVPLLDGFLVNVNESRQVIESLLDQIPEMFADTRETETVFGPVIQAG
LEALKAADCAGKLFVFHTSLPIAEAPGKLKNREDKKLIGTDKEKTLFQPQVGFYKDLAKD
CVAQGCCVDLFLFPNQYVDLATLGVVPVSTGGSIYKYTYFQAQADQERFLNDLRRDVQKQ
VGFDAVMRVRTSTGIRATDFFGSFYMNNTTDVELAGLDCDKAITVEFKHDDKLSEETGAL
MQCAVLYTSCSGRRRLRIHNMAVNCCSQLADLYRNCETDTIINYFAKYAFRGVANNPTKA
VRDTLVNQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLMPGADVSLD
DRAYLKQLISCMDVTETHVFFYPRLLPVMKLESGSLPVAVRDSEERLSKGGVYLLETGLH
LFLWVGASVQQELLLNIFGTPSFSQIDPNLTSLPVLDNPFSQRLREIIDSFRAQRSRYMK
LMVVKQEDRSELIFKHFLVEDKSASGGASYVDFLCHMHKEIRQLLS
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaccagcacactccaatggcctctccttacggccagccccagcctggctat
ggtcaacctagctacgctccccaggatggggggtatcctggcccttactcaccttacaac
ggccctgcttcagcccatcagcccggtgttccaccacaaggttattctcctttcacaagc
tttccctctaaggctgtggcagccaacccagtctctgacctctcctctcctcttgactta
ggtccaacaaggcttcctcccacctctgcaccccctcctgcttcagctccacagccctat
aaccagtacacccacagtcaaggggacatgcaaaatggacccccacccatgacacaggca
ccgcccaggcctgctgcagcccagccgtacacccagggacatgtgaacatgagcgggtcg
ctgccttcctatccacaacactacgggcctccgccttcaatgcagcaggtcaccaatcag
atgactggaatgcagatcacgcctggaccaccaacctctgcagggccaggatatgttcct
cctcacagctcccagcctcctctcagtactgcctactcagctgcagcgcagccatcctac
acccaggctccccctcctgcatcatccgctcccacccagcctccacctgcgagtggtcct
gcagcttctcagcagtactacggaggccctccaccttcttctcaacaaccattcaactct
tccctcccccccacctcccagcagcagttcacctcttctgttcctccgccgccctcccag
cagtcttttcccccctcctcattttcgggtcccgctcctcctcccacgcgccctcagggt
ccgccgatgtctcagtcccagccccagatgccctttccttctcagcctcctttctcagct
cctccacctgttagccaacctggcttcgccggtggcccacctccacccgtccaaggatct
ttcccacctcagcctacacaaccttcctctcagccagggtcttttcctcctcctgggccc
cctcccacctcagccacctcaggtcagtacacaacctccatggcccagcagccgcctcct
cctacccagccatccccctatcactcaggacccccgccccccagagttcagatgcctcca
acttctatgggacagagtaaccacatgcctccgggtcctccaggacccctgcagcagcct
cctgctcagcctggcatgcagacaggattccctcctcaacaaaatggtgcatttgggcag
gtaaggggcccgcagcctggatatgcaggcccttaccctggacagcccaactatggagcc
caagcgccagctcctgctccttcagcacagaaaagacttgatccggatgcaattccaagc
ccgcaagcgtctgacatgccggctgtgcagaaatcaagacatagaatagatccagatgct
atcccaagcccaatccaggtaatagaggacgacaaggccaagtctactgagccattcaca
acaggggtcaggggtcaagccccgccccttgtcacaaccaactttcaggtgaaagatcaa
ggaaacgccagtcccaggtttatccgttgtacagcctacaatatgccttgcacgtccgat
atggcaaagcagtcccaggtccccctggctgctgtcattaagccgctcgccacgctgccc
ccagatgagaccccgccatacatggtggaccacggcgaggctggtccaatccgttgcaac
aggtgcaaggcctacatgtgtccctacatgcagttcatagagggaggtcgccgcttccag
tgtggattctgcagctgcgtcacagaggtgcctccacaatacttccagcatctggatcac
accggtaagagagtggactgctatgacaggccagagctgtccctcggcacctatgagttc
ctggcaactgtggactattgtaagaacaacaagcttcctcagcctccagccttcatcttc
ctcatagatgtttcctacaacgcggttaagagcggcctggtcagcttgatctgcaatgaa
ctcaagactctccttgatctcctgcccagggaaaacccagaaatggattctgtggtgcgg
gtgggtttcgtcacctacaacaaggtgctgcacttctacaacgtgaagcccactctggcc
cagccccagatgctggttgtgtcggacgtgtcggacatgtttgtgccgctgctcgatggg
ttcctggtaaacgtgaacgaaagccggcaggtcatagagagcttgctggatcagatccca
gagatgtttgcagacacgagggagacggaaacggtctttggacccgtcatccaggcagga
ctggaagcccttaaggctgccgactgtgccgggaagctgtttgtgtttcacacctctctg
cccatcgcagaggctcctggaaagctgaaaaaccgagaagataagaagctaatcgggaca
gacaaggagaagactctgtttcagccgcaggttggattttacaaagacctggcaaaggac
tgtgtagcccagggctgctgtgtggatcttttcctcttccctaatcagtacgtcgatctg
gccacactaggggtggtccctgtctccactggaggttcaatctacaagtatacctacttt
caggctcaggcagatcaggagcgattcctgaacgacctgaggcgggacgttcagaagcaa
gtcggattcgatgccgttatgagggtgcggacaagcacagggatccgagcgacagacttc
tttggatcgttttacatgaacaacaccacggacgtggagctggcaggcctggactgcgac
aaggccattaccgtggagttcaaacacgacgacaagctcagcgaggagacgggagcccta
atgcagtgtgccgtgctgtacaccagctgcagcggtcggaggcgtctgcgcatccataac
atggcggtgaactgctgttcacagctcgccgatctttaccgcaactgtgagacggacaca
atcatcaactactttgccaaatatgctttcaggggtgttgctaacaaccccaccaaggct
gtgagggataccctggtcaaccagtgtgctcagattcttgcttgctatagaaagaactgt
gccagtccatcatctgctggtcagctcatcctgccagagtgcatgaagcttctccccgtt
tacctgaactgtgtcctgaagagtgacgtcctgatgccaggagccgacgtctcgctggat
gacagggcttacctcaagcagctgatcagctgcatggatgtcacggagactcatgtcttc
ttctacccccgcctgctgccagtgatgaagctggaaagcgggtcgttgcccgtagcagtg
agggactctgaggaacggctttccaaaggaggggtttacctgctggagacggggctccac
ctcttcctgtgggtcggagcaagcgttcagcaagagctgctcctcaacatctttggcaca
ccgagcttcagccagatcgatcccaacttgacgagtctgcctgtcctggacaacccgttc
tcacaaagactcagagagatcattgactccttcagagcgcagcgatcacgatacatgaag
ctgatggtggtgaaacaggaagaccgatctgagctgatcttcaagcacttcttagtggag
gacaagagcgccagcggcggagcgtcatacgtagacttcctgtgtcacatgcacaaggag
atccgccagcttctcagctaa
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