Cyprinodon variegatus (sheepshead minnow): 107088977
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Entry
107088977 CDS
T06110
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107088977 (sec16a)
Membrane trafficking [BR:
cvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107088977 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
107088977
NCBI-ProteinID:
XP_015236942
Ensembl:
ENSCVAG00000022453
LinkDB
All DBs
Position
Unknown
AA seq
2361 aa
AA seq
DB search
MQPAPRGGVPGVSAPSRSGRIRPQKQATSATATRPPPAQPITDPFAFGRAQPPMAAGGHP
TIPNSNPPQMQTQPNVMYSQLGSGLPPQPQMLENVGAAGAGPPPPSLPGVTLFTPQSAAS
PGGFPSPSPTGYSSANSEQDYFNSRDPTSSMPTDASHTVPAPSNTLFNQDFQAQHLGHSL
PFQPLPLTSSSSQWVPDHSSRPPSVQNYFQPTTDPPARPSNIPPQTQMYPTHSQSPHHNA
PTPLAHPANPQSQAPPIPLQNPGPAASSLLPDPNGPPQHNLNFQTQSYFSQSSAPHDIWF
NQPAQDSGYHQMGTGSSHPPPPTDFSGSPHVSNTGYRPASQPVPSSAPSSDAYAQDSGTI
SMFFKGSDVENEETLADERNKALNGVATSFQPNSNPPAQSSHPDLSVDYQGVSVLDHSCL
PYMNESSHPSQGHNQKPPESDFDHVENLECVPNQEVLPNESSSSATAAPNTVEQFETGPN
LETPDSIPRPMRSASVSSNYSNLSHGSGTGPRRHQGVEGTFIQQESPRLVDNPSAPPAAA
AAGGYFEQIDTSPGGEVGIHQGSVEHMWHPTPSPPKPTGIFQASANSSFEPVRSHGVGVR
PVEVDRAKMVAEGGADCTSGNLEQPPDNMENIFGSGQAAASAPADGLPNQTHPVVHSYSR
PSSRAFGATRPCESPATTLWAQNDPASLGANILLAPAAPTVLAPLREPSADVIQPPEDSP
LDLQPSQRVHTASQQHSENLENPPKVSDAEPADSQSSLGYASLLVSGSPHQPVLIAPPVS
NYSVIPPSIPTQSSAQPNHGDVTPAERSLTQGLGANASQSSAPPKQNPLLPSGSGPFCSS
APSQAPLNLTRNKSAGATSEIPTPPLSQQVHPPLSRGQSLGAESHCSVNSQPTSLATTSV
SNHNSTLNYELLDFSMHQSYAQSHAYGQPSSLHEASQSSNGFYLQVTKDAQQGVRDVGNA
SVQTTVPSSSSQASTAPTQAAANTQQMQNEPPKTSDSQVAMQGQRDAPPVPVSGTQPSHG
QYSTLVQDPAAGNTPAPPPAASAAYPPVPQGPLPPGVSQPAPAEAPRPPSSAGSHQGYVH
PPPPVAGQAYSGYYGNYGEYPDSRGQYPPGHYPPPAGDPRVQPYYQDTTYRGRADPWYGR
YDPQNPGYRDPNYQYREPQSDRPSSRASQYSDRPSSRQGYPEDYQRANRSTYSEYYADYP
KHYDYRGYRYGQYDQRYAGYYDQSYWSYYNESYKNGYYNQQYPARKDGYDDQWQYYPGYD
PSFDEDNMRGREAYGDDFDRRSVHSEQSAHSVHSSTSHHSRRSSFSSRSQQSQVYRSQPD
LSTVYDATQSTLPVDYSHAHYPNQADASQNYSQYMYPSEYTADSTWIAPEQPPPRPATPE
KYTMPHRCARFGPGGHLIQVLPNLPSAGQPALVEIHNMETMLQDTSDQAELRGFPGPLIK
EETHKVDVIKFSQNKAMECSRDNNLLDRDSARLLWDFIMLLCRQNGTVVGTDIADLLLKE
HRSVWLPGKSPNEANLIDFNNEPLARAEEEPGAGPLSLLSDTFMIVPENIGKETERFREL
LLFGRKKDALEAAMKGGLWGHALLLASKMDNRTHARVMTRFANSLPMNDPLQTMYQLMSG
RMPASATCCGEERWGDWRPHLAMVLSNLTHNMDLDTRTITTMGDTLASKGLTDAAHFCYL
MAQVGLGVYTKKSTKLVLIGSNHSLPFNQFATNEAIQRTEAYEYAQSLGSQHCSLPNFQV
FKLIYACRLAEAGLCAQAFHYCEVISKTVLMHPSYYSPVFISQIIQMSEKLRFFDPQLKE
RPEQELFIEPEWLIHLKQLDGQIKTGVITYNVDRSTPAQFDCSSESSDLDHQSPPEPYNM
PLEVDGQAPENPLMSSLVPGPPPQGVQLMPPAPASILQDGMAPPQLSSSSDVPQFYPVPP
NGPPGQIPMPGFHPQDPGLAHPPFQPQHEQPNAYPGAHQQHGPPPQEGQMSPHMPTSQVP
HSPVQMTHPPFQMPQHMPPSPGHMAPMEQPPLSHPEMHPSHIMSSSPPRSSFTPQMDLYD
HMANMGSRRSRTTSQSSMHLPSGRSSRRASESSTHSGRERSNSAVKQASPPPPSIPEQPR
KEEPKKAKKDSPEKNKGWSFWPFGKRKNEAHLPDDKNPSIVWDEKKNRWVDLNEPEEESK
PPPPPPTGFPKMPQMPGPGGPPAPPGTGSAVNMFSRKAGTKSRYVDVLNPSRTSKPSGAA
PAPVDLFAPLAPMPMPANLFVPSSAPNDQQPLEGSEGGNQEQNSPSSSAAPQVFNPTLLP
PAPEGPPVPDGLQSGELSRSSSMSSLSREVSQHLNQSHPAQGTAPTGGVTFYNPAQFAQT
SAPSGGGPRSSRLSQRYPVSK
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagctcctcggggtggcgtgcctggcgtctctgcccctagtaggtcaggcagg
ataaggcctcaaaagcaggcaacgtcagcgacagctaccaggcctcctcctgctcagccc
attacagacccttttgcttttggcagagctcaaccccccatggcggcaggaggtcatcct
acaatacctaacagcaaccctccacaaatgcaaactcaacctaacgtcatgtactctcag
cttggctctggactccctccacaaccgcaaatgctggaaaacgttggagctgcaggagct
ggtccacccccaccctctctaccaggggtgactctcttcacccctcagagtgcagcatct
cctggtggtttcccatcgccaagtcccacaggctattcgtcggctaacagcgaacaggat
tatttcaattcaagagatccaacatcatctatgcctacagatgcatcccatacggtacca
gcacctagtaacacactttttaaccaggactttcaggcccaacatcttggtcattcttta
ccttttcaacctctccctctaacatcttcgtcttctcagtgggttcctgatcactctagc
cgccctccctcagttcagaactatttccaacctactactgatccaccagcacgaccctct
aatataccaccacagacccagatgtaccccacccacagccaatcaccccaccacaatgcc
cctacccctttagctcatcccgcaaatccccagagtcaagcccctcctattccacttcag
aaccctggaccagctgccagctctctgttgcctgacccaaatggacctccgcagcataat
ttaaattttcaaacccagagttatttcagtcagagttctgcgccccatgatatatggttc
aaccaacctgcacaggactcaggctaccaccaaatgggtactggctcaagccatcctccg
ccccctacagacttctctggatcccctcatgtttccaacactgggtacaggcctgccagc
caacccgtgccgagttctgccccttcctctgatgcatacgctcaggactcgggtacaatc
tcaatgtttttcaaaggcagtgatgtggaaaatgaagaaacgcttgctgatgaaagaaat
aaggcgttaaacggtgttgccacatcatttcagcctaacagtaacccaccggcccagagc
agtcatccagatctctctgtggattaccaaggagtttctgttctggatcattcatgcctt
ccatacatgaatgaaagcagtcatccttcacagggacacaaccagaagcctccagagagt
gactttgaccatgttgagaatttggagtgtgttccaaaccaggaagttctgcccaatgaa
tccagcagcagtgctactgctgcacctaacacagtagaacagtttgaaacaggacccaat
ctggaaactccagattctattccaagaccaatgagatccgcgagtgtgtcatccaactac
agcaatttaagccatggaagtggaactggccctcgtcggcaccagggagtcgaaggaact
tttattcagcaggaaagcccgcgtctcgtcgataatcccagcgctcctcctgctgctgcc
gctgctggaggctacttcgaacagattgatacatctccaggtggtgaggtgggcatccac
cagggttcggtagagcatatgtggcacccaacacccagccccccgaaaccaacgggtatt
ttccaagcaagtgcaaatagctcatttgaacctgttcgctcgcacggagttggagtacgt
cctgtggaagttgaccgagctaaaatggtcgctgaaggaggtgctgattgtacatctggt
aacttggaacagccaccagacaatatggaaaacatttttgggtcaggacaagctgcagcc
tctgctcctgcagatgggttacctaatcaaacacacccagtggtgcattcttattctcga
ccttcctctcgtgcttttggggccacacggccctgtgagagtccggccactactctgtgg
gctcagaacgatcctgcaagcttgggtgctaacatcctccttgctcctgcagcaccgacg
gtgttggcccctttaagagaacccagtgctgatgttatccaaccaccagaagatagtcca
ctggacctgcagccctctcagagagttcacacagccagtcagcagcactcagagaaccta
gaaaacccaccaaaggtgagtgatgcagagccagctgactctcaaagcagcctaggttat
gcatctctgcttgtctccggctcaccccaccaacctgttttaattgccccgcctgtatcc
aattacagtgtaattcctcccagtattcctacccaatcgtcagctcagcctaatcatgga
gatgtgactcctgccgaaagatctctcacccaggggctgggtgctaatgcctcccaatct
tcagccccacctaaacaaaatcctctccttccttctgggtccgggcctttctgttcctct
gctcccagtcaggccccactcaatctgactcgtaataaatcagccggagcaacatcagaa
atcccaactccaccactctctcaacaagtccatcctcctctttcacggggccaatcattg
ggggcggaaagccattgtagtgttaattcacaacctacttctcttgcgactacttctgtc
tctaatcataattcaacattaaactacgaactgcttgatttttctatgcaccaatcatac
gcccaaagccatgcatatggccagccgtcttctctgcatgaagcatcacagtctagtaat
gggttttacctgcaggtcaccaaagatgctcaacaaggggtacgagatgtagggaatgca
tctgtccagacaacagttccttcatccagctcacaggcatcaacagcacccactcaagct
gctgctaacactcagcagatgcaaaatgaacctccgaaaacatctgattctcaggttgca
atgcagggacagagggatgcccctcctgttcctgttagtggaacccaaccttctcatggt
caatattcaactttggtacaagatcctgctgcaggaaacactcctgctcctcctcctgct
gcttctgcagcatatccaccagttccacagggaccactacctccaggggtttctcagcca
gctccagctgaggcaccacgacctccttcctctgcaggcagccatcaaggctatgtgcat
ccacctcctcctgtagcaggacaggcttatagtggctactatggaaattatggcgagtac
ccagacagcagaggacagtatcctcctggccattatccacctccagctggagatcctaga
gtgcagccatattatcaagatactacctaccggggaagagccgatccttggtatggcaga
tacgacccacagaacccaggttaccgtgatccaaactaccaatacagagagccacaatct
gaccgacccagttctagggccagtcagtactccgacaggccctcatccaggcaaggctat
cctgaagattaccaacgggcaaaccgaagcacctacagtgaatattatgcagattacccc
aaacactatgattatagagggtacagatacggacagtatgaccaacgatacgcgggatac
tacgatcaatcctattggtcttattacaatgaatcctacaaaaatggctattataaccag
cagtatcctgccaggaaagatggctatgatgaccagtggcagtactaccctgggtatgat
cccagctttgatgaggacaacatgcgaggaagagaggcttatggggatgactttgaccgg
cgcagcgtgcacagtgagcagtcggcacacagcgtgcacagttctactagtcatcacagc
agacgaagcagcttcagctcacggtcacagcagagccaggtgtacaggagccagcctgac
ttgtctacagtttatgatgcaacccaatccactctgcctgttgactactctcatgcgcac
tacccaaatcaagcggatgcctctcagaactacagccagtacatgtatccctcagaatac
actgcagacagtacctggattgccccagagcaacctcctcctcgtcctgcaactccagag
aagtataccatgccccaccgttgtgctcgctttggacctggtggtcatctgatccaagtc
ctgcctaatctcccctcagccgggcagccagctctggtggagatccacaacatggagacc
atgctgcaggacacctctgatcaggctgaactgcgtgggttccctggacctctgattaag
gaggagacccacaaggttgatgtgatcaaattctcccagaacaaagcaatggaatgttct
cgtgacaacaacctcctggacagagactctgctcgcctgctctgggacttcatcatgttg
ctttgtagacagaatggaactgtggtcggcacagacatcgctgaccttttgctgaaggaa
catcgctccgtctggctgcctggcaagagtcccaatgaagccaacttgatcgattttaac
aacgaacctcttgcgcgagctgaagaggagcccggagctgggccgttgtccctcctgtcc
gacactttcatgatcgtcccggagaacattggcaaggaaacagaacgcttcagggagctg
cttctgtttggacgcaaaaaggatgccctggaagcagccatgaagggaggcctttggggt
cacgctctgctgttggctagtaagatggacaacaggacacacgcacgtgtcatgacgagg
tttgctaatagtttgccaatgaacgaccctcttcagactatgtaccaactgatgtcagga
agaatgcctgcttcagcaacttgctgtggagaggagaggtggggtgactggcgccctcat
ctggccatggtgctctcaaacctcacacacaatatggacctggacacccgtactatcacc
actatgggagacactcttgcttctaagggtctaactgatgctgctcatttctgctacctg
atggcccaagttggcctgggagtttacaccaagaaaagcaccaagttggtcttgattggc
tccaaccacagtttgccctttaatcaatttgccaccaatgaagccatccaaagaactgag
gcctatgagtatgctcagtctctgggctcccagcattgttcactgcccaacttccaggtg
tttaaattgatctatgcatgccgactggctgaggcaggcctgtgtgcccaagcttttcat
tactgtgaagtgatctcaaagacggtccttatgcatccctcttactactcccctgtgttc
atcagccagattatacagatgtcagaaaagctgcggttctttgatccacaacttaaggaa
agacctgagcaggagctgttcattgagcctgagtggctgatccacctcaaacagctggat
ggacagatcaagaccggagtgattacatataatgtggacagaagtactccagcacagttt
gactgcagcagtgaaagttcagacttggatcaccagagtccccctgaaccttacaacatg
ccactggaagtggatggtcaagcccctgaaaacccactcatgagctcattagtgcctggg
cctcctccacagggagtgcagttgatgcctccagctcctgcttctattctccaagacggg
atggctccgcctcagctctcatcctccagtgacgttccccagttctaccctgtaccccct
aatgggccgccaggccaaatccccatgcctggatttcatccacaggatcctggccttgcc
caccctcccttccagcctcaacatgagcaaccaaatgcttatcctggagctcaccagcaa
catggtcctcctccacaagagggccaaatgtcccctcacatgcctacatcacaggtgcca
cattcacctgtccaaatgacccacccaccttttcagatgccccagcacatgcccccctct
cctggacacatggcccccatggagcagccacccctgtcccacccagagatgcatccgtca
catataatgtcgtcctccccaccccggagctccttcactcctcagatggacttatatgac
cacatggcaaatatgggctcgagaagatcaaggacaacttcacagtcttcaatgcatttg
ccatcaggacgcagctctcgcagagcctctgagtcatcaactcactccggaagagagcgg
agcaactctgctgtgaaacaggcctctccaccgccgccctctatccccgaacagccgcgt
aaagaagagcccaagaaagccaagaaagattctccagaaaagaataaaggctggtcgttt
tggccctttgggaagaggaaaaatgaggctcatttgccagatgacaaaaatccttctatt
gtttgggatgagaagaaaaatagatgggttgacttaaatgaacctgaagaagagagtaag
ccccctcctccacctcccactggttttcccaagatgcctcaaatgcctggtcctggaggg
ccccctgcccctccaggtactggttctgccgtcaatatgttttccaggaaagcaggcacc
aaaagcagatatgtggatgttctgaacccgagcagaacatctaaaccgagtggagcggcc
ccagctccagtggacctattcgctcctttggctccaatgcccatgcctgctaacctgttt
gtgcctagttcagcgcctaatgaccaacaacccctggaaggcagtgaaggtggaaatcaa
gagcagaattcaccaagcagcagcgctgctccacaggtgtttaacccaacactgttaccg
ccagccccagaaggacctcctgttccagatggtttgcaatcaggcgagctgtcacgttct
agctcaatgagttctttatcacgtgaagtgagtcagcatttaaaccagagtcatcctgcc
cagggtactgcacccaccggaggtgtcactttttataaccctgctcagtttgcacagaca
agtgcgccatcaggaggtggaccacggtctagtcggttgagccagcgctatccagtttcg
aagtaa
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integrated database retrieval system
