Cyprinodon variegatus (sheepshead minnow): 107088980
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Entry
107088980 CDS
T06110
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cvg01100
Metabolic pathways
Module
cvg_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
107088980
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvg01003
]
107088980
Enzymes [BR:
cvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
107088980
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
107088980
Glycosyltransferases [BR:
cvg01003
]
Glycan extension
O-Glycan
107088980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATG14
Motif
Other DBs
NCBI-GeneID:
107088980
NCBI-ProteinID:
XP_015236955
Ensembl:
ENSCVAG00000004621
UniProt:
A0A3Q2CEH4
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MLHAVMLRRGLLTWVSRVGGLLVLLCCSLSLLYLMTCSPPHSNNPPLSHVLPHAGSNRPS
LGGALPAIGAAAGLSDTKGAGDIAQSGGPPAGPSYQMLLQEREEQHRLYISSLKKEISQL
KEDLQERSLQLKKVQETLKTASNGPAERQDWGTETQGEGFGEVQGAKSQQSDLQEFLRTQ
LSKAEVTTGTRLPNEYAVVPFESFTLQRVYQLEMGLTRHPEEKPVRKDKRDELGEVLEMA
LHSLNTPSSQQDNRVPLEKAQTSKVYTPSDFVEGMTRTERDKGTLYELTFRGEASHEFRR
LVLFRPFGPLLKVKNERMDTTNILINFIVPLSRRADKFKQFMHNFREVCVRQDGRVHLTV
VYFGKEQMSEVRSTLENISREVNFKNYTLLQLDEEFSRGRGLDVGARAWKGGNVLLFFCD
VDIYFTADFLNTCRLNAQPGKKVFYPVLFSQYNPTLIYGSPEHIPPVEQQLVMKKDTGFW
RDFGFGMTCQYRSDFINIGGFDIDIKGWGGEDVHLYRKYLHSSLLVVRAPSRGLFHLWHE
KHCADELPPDQYRMCMQSKAMNEASHGQLGMLFFRHEIEAHLRKQKQQNPKKT
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgctacatgcagttatgttgaggcggggacttcttacttgggtgtctcgtgttgggggt
ctgctggtgcttctctgttgttccctctcactcctctatctgatgacctgcagccctcca
cattccaacaaccctccacttagtcatgtattgccccatgctggctcaaaccgtccaagc
cttggaggtgcactgcccgcaatcggagctgcagcaggacttagtgacacaaaaggagct
ggagatattgcccaaagtgggggtccaccagcaggtccctcctatcagatgctgctccaa
gagcgtgaggagcagcaccgcctctacatttcctccttgaagaaagagatttctcagctg
aaggaggacttacaggaacgcagtctgcagctgaaaaaagtgcaggagaccttgaaaaca
gcttcaaatggaccagcagagaggcaggattggggcaccgaaacacaaggggagggcttt
ggagaggttcagggagccaagagtcagcagtctgacctacaggagttcctgagaacccaa
ttgtcaaaggctgaggtaaccactggcaccaggttgcccaatgagtacgctgtggtgcct
tttgagagcttcaccctgcaacgggtgtaccaactggaaatggggcttacgcgtcatcct
gaggagaagcctgtgaggaaagataagagagatgagcttggagaggtgctggagatggct
ctgcacagtctcaacacaccctcatcacaacaagacaacagagtcccactagaaaaggct
caaacaagcaaagtctacacgccatctgactttgtagaaggtatgactcggacagagagg
gacaaagggacgctgtacgagctgaccttcagaggtgaggcaagtcatgaattcagacgt
ctagtcctcttccgacccttcggacccctgctaaaggtcaaaaatgaaaggatggacacg
actaatattctgattaatttcatcgtcccactgtcgagacgagcggataagttcaaacag
ttcatgcacaacttcagggaagtctgtgtgcgtcaggacggccgggtacatctgacagtg
gtgtattttgggaaagaacagatgagtgaagttcgaagcactctggagaacatatctcgg
gaggtcaatttcaagaactacacactgctgcagctggacgaggaattttcccggggaagg
ggtttggacgttggggcccgggcttggaagggaggcaacgtgctgctttttttctgtgac
gtggacatctacttcacagctgacttcctcaacacctgtcgactcaacgcgcagcctggt
aaaaaggtcttctaccctgtgctattcagccagtacaaccccaccctgatttatggaagt
cctgagcacatccctcctgtggagcagcaattggtgatgaagaaagacacaggcttctgg
agggatttcggtttcggtatgacctgtcaatacaggtctgacttcatcaacatcggagga
tttgacattgacatcaaaggctggggtggggaagacgtccacctctacagaaagtatctc
cacagcagccttttggtcgtcagagcgccgtcgcgcggcttgttccacctgtggcacgag
aagcactgtgctgacgagttgcctcctgaccaatatcgaatgtgcatgcagtccaaggcc
atgaatgaggcctcgcatggccagctggggatgctcttcttcaggcatgagatcgaagct
cacctccgcaagcagaaacagcaaaaccctaagaagacgtga
DBGET
integrated database retrieval system
