Cyprinodon variegatus (sheepshead minnow): 107088984
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Entry
107088984 CDS
T06110
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K-like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107088984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107088984
Spliceosome [BR:
cvg03041
]
Common components
Common spliceosomal components
hnRNP proteins
107088984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
MOEP19
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
107088984
NCBI-ProteinID:
XP_015236961
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MTMEMKDEQQEEDISFSNTDTNGKRPAEDLDEEQAFKRSRNIDEMVELRVLLQSKNAGAV
IGKGGKNIKSLRTDYNASVSVPDSSGPERILSVSASIDTIGDILLKIIPTLEEYQHYSGI
DFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPER
VVECIKVILELVSEAPVKGRTQPYDPNFYDETYDYGGFTMLFEDRGRRPMGGFPILVRGG
YDRLPPLRGSRPLPPSRRDYDDISPRRGPPPLSRGGRAGSRARNLPLPPPPLPRGGGDRF
SHGSYHGSMDDRPSERRGRDRYDSMSGGGYDNISSWDRFPPGGRGSYSDIGGPVISTQVT
IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQN
SVRQYSGRFF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggaaatgaaagacgaacagcaggaggaggacatttcattcagcaacactgac
actaatggtaaacgtcctgctgaggacctggatgaggagcaggccttcaaacgttcacgc
aacattgatgagatggtggagctgcgggttctgcttcagagcaaaaatgcaggagctgtc
attggaaaaggtggcaagaacataaaatcactgcgcacagactacaatgccagtgtttca
gtcccagacagcagtggcccagagcggatcctgagtgtgagtgccagtatcgacactatt
ggagatattctactaaaaatcataccaacattagaggagtaccagcattacagtgggatt
gattttgactgtgagcttcgcctgctgatccatcagagcttggctgggggtataattgga
gtgaaaggtgccaagataaaggagctgagagagaacacccagaccaccatcaagctgttc
caggaatgctgtccacactccacagacagggtcgtcttagtaggaggaaaaccagaacgt
gtggttgaatgcatcaaagttatcctggagctagtgtcagaggcaccagtcaaaggccgc
actcagccttacgaccctaatttctatgatgagacatatgattatggtggcttcaccatg
ttgtttgaggacaggggcagacgacccatgggtggatttcccatccttgtgcgtggtggt
tatgatcgcttgcccccgttacgtggcagcagacctctgcctccctcaagaagggactat
gatgacataagcccccgccgaggtcctcctccacttagtagaggaggaagagcggggagc
cgagcacgaaacctgcctcttcccccacccccactaccaagaggaggaggagaccggttt
tcacatggcagctatcacggcagcatggatgacagaccaagtgaaagaagaggcagagac
cgctatgacagcatgagtggaggtggttatgacaacatttcttcctgggaccgctttcct
cctggtggcagagggtcatacagtgacatcggaggcccggtcatctcaacgcaagtcacc
atcccaaaagatctggccggctccatcattggaaagggcggccagagaatcaagcagatc
cgccacgagtctggggcatctatcaagattgatgaaccactagagggctctgaggaccgc
atcatcaccattactgggacacaggaccagatccagaacgcccagtacttactgcagaac
agtgtgaggcagtactctggtcggttcttctag
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