Cyprinodon variegatus (sheepshead minnow): 107089076
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Entry
107089076 CDS
T06110
Symbol
lgr5
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107089076 (lgr5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cvg04030
]
107089076 (lgr5)
G protein-coupled receptors [BR:
cvg04030
]
Rhodopsin family
Others
R-spondin
107089076 (lgr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
7tm_1
LRR_EndoS
LRR_LRWD1
LRR_R13L1-DRL21
LRRNT
LRR_6
Motif
Other DBs
NCBI-GeneID:
107089076
NCBI-ProteinID:
XP_015237104
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MRDMRGLGALLAAFAVLLAGSRSSEAGVRRQSEAVNGSTTCPDRCRCEGDGLLHRADCSD
LGLREIPSNLSVFTSYLDLSMNNLTVVSSGALSNLHFLEELRLAGNDLSFIPKGAFNGLY
NLKVLMLQNNQLTSVPAEAFNNLHNLQSLRLDANHIVNVPPGCFSGLRSLRHLWLDDNSL
TEVPVEALEELPTLQAMTLALNHIAHVPDDAFSKLGRLVVLHLNNNRIVSMGTNCFHGLH
SLETLDLNYNSLVEFPTAIRSLSHLKELGFHSNNIQSIPEHAFTGNPSLISLFFYDNPIQ
SVGRSAFQNLPELRTLSLNGAAELTEFPDLTGTKSLESLTITGAQITSLPGFMCEELPNL
QLLDLSYNKIQTLPSFSGCESLQKIDLHHNEIEELRENTFTGLMSLRSLDLSWNRLSSVE
PNSFFALTALSKLDLSSNQLSSLPLTGLQSLTRIRLVGNDQLMELIPREDLPRVRVMELP
YAFQCCAFISCEKKGGEEGGLSWEREEAADSTAIDPPFPSSQVDQDWDDFLMQFEDEPKP
QHSVHCSPTPGPFRPCLRLLGSWMIRGGVWLIAGISLVSNGLVVLSVFFSPASRVTPPKL
LIGLLALVNGLMGVWGGWLAAVDAWTFGSFWRYGVEWESSSLCRLSGFLCVFASQTGLFL
LTLAALERCLSAAGATQSNRTESNNGHSMSPLFIRFSVCLCFLLGFIITLPPLVVGESSS
SFCLPLPSSSSSSSMAFSVSLVLFDSLCFLVMTLAYTRLYCHAGKALPASDEEAALTRHV
AWLLFSDCLLYLPVAFLSFSSLLRLPAAGPEAAKGVLLLVAPLPACINPLLYLLFNPLAR
GELAALATRACVGAVASKLQRRGASGGRPLDSTYDEDAEKQSCDSTQALVVVEGVKEEEE
QRSKMQQLLSVDQHC
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacatgcgggggctcggggctttgttggccgcctttgcggtcctcttggccggg
tcgaggagctccgaggccggagtgaggaggcagagcgaggcggtgaacggttccaccacc
tgccctgaccgctgccgctgcgagggggacgggctgctgcaccgggcggactgctcggac
ctggggctgcgggagataccgagcaacctgagcgtgttcacctcctacctagatctcagc
atgaataacctgactgtggtgtccagtggagctctatccaacctgcactttctggaggag
ctacgtttagcaggaaacgatctgtccttcatccccaaaggagcgttcaacggcctctac
aacctaaaagtgcttatgctgcagaacaaccagctgacttctgttcctgctgaagccttt
aacaaccttcacaaccttcagtcactccgtctggatgccaatcacatcgtcaacgtccca
cccggctgtttctctggactgcggtcgcttcgccacctctggctggatgacaactctctg
accgaagtcccggtcgaggctctggaagagctgccgaccctgcaggccatgacgctggcc
ctcaaccacatcgctcacgtcccggacgacgcgttcagcaagttgggtcgcctggtggtg
ctgcatctcaacaacaataggatcgtttccatgggcaccaactgcttccacggactccac
agcctggagacgttggatttaaactacaacagcctggttgagtttcctacagccatccgc
tctctcagtcacctcaaagagctaggttttcatagcaacaacatccagtccattccagaa
catgccttcactgggaacccctcactgatctctttatttttctacgacaatccaattcag
tctgtgggacggtcggcctttcagaacctgccagagcttcggacactatctctgaatgga
gcagcagaactcacagagtttccagatctgacaggaaccaagagtctggagagcctgacc
atcactggagctcagatcacttctctacccggcttcatgtgtgaggagcttccaaacctc
cagctgctcgacctctcgtataacaagatccagactcttccaagcttctctggctgtgag
agcctccagaagattgatcttcaccataacgagatagaggagctgagggagaacaccttc
acggggctgatgagccttcgctcactggatttatcctggaatcgtttatcatccgtggag
ccaaactcgttctttgctctgactgctctctccaaactggacctttcgtccaatcagctg
tcttctctccctcttactggtctgcagagtttaactcgcattcggctggtgggaaacgat
cagctgatggagttaataccccgagaagatctgccacgagtcagggtgatggagcttcct
tatgctttccaatgctgtgccttcatctcctgtgagaagaaaggaggagaagaaggaggt
ttatcctgggagagggaggaagcagcagactccactgcaatagatcctcctttcccttcc
agccaagtggaccaggactgggacgattttctcatgcagtttgaagacgagcccaaacct
caacactctgttcactgcagcccaactccaggaccgtttcgtccctgcctccgtctgctt
ggcagctggatgatcagaggcggggtctggctcatcgctggaatctcattggtcagcaac
ggtcttgtggtcctctccgtcttcttttctccagcaagcagggtcacaccccccaagctc
ctgattggcctgctggctctggtgaacgggctgatgggcgtgtggggcggctggctggcg
gcggtggacgcctggacgttcggcagcttctggaggtacggggtggagtgggagagcagc
tccctgtgtcgcctcagcggcttcctgtgtgtgtttgcatcccagaccggcctcttcctg
ctgacgctggcggccctggagcgatgcttgtctgccgcaggtgcaactcagagcaacaga
accgaaagcaacaacggtcactccatgtcgccgctcttcatccgtttctccgtctgtctg
tgcttcctgctgggcttcatcatcaccctgcctccgctggtggtgggtgagagtagctcc
tccttctgtctgcccctcccttcgtcctcctcgtcctcctccatggccttttcagtctcc
ttggtgctcttcgactccctctgtttcctcgtcatgacgctggcctacactcgcctttac
tgccatgccggcaaagctctgcccgcctcagacgaagaggcggcgttgactcgtcacgtc
gcctggctgctcttctccgactgcctcctttacctcccagtcgccttcctctccttctcc
tccctcctgcggctccccgccgccgggccagaggcggcaaaaggagtcctgctgctcgtg
gcgccgctaccggcctgcataaaccccctcctctacctcctcttcaacccgctcgccaga
ggggagttggcagcactggcgacacgcgcctgcgtgggtgcagtggcgtctaaattacaa
agaaggggagcttctggaggacggccgctggattcaacatacgacgaggacgcagagaag
cagtcatgtgactctacgcaggcgctggtggtcgttgaaggtgttaaagaggaagaggag
cagcggagcaaaatgcagcagttgctgtcagtcgaccaacattgttaa
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