Cyprinodon variegatus (sheepshead minnow): 107089077
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Entry
107089077 CDS
T06110
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107089077 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107089077 (cnot2)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107089077 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107089077 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
107089077
NCBI-ProteinID:
XP_015237105
Ensembl:
ENSCVAG00000019882
UniProt:
A0A3Q2DE23
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MFGATRKKFMEGGIESEYASDDSGLYYGHTSMFAPHRADKDMLSSSSSTSQLSQLGASLY
APQSALGFPLRGINSSAAAPLSRSSLNQPASQLSGHTSTPNSGQLHTPPSPSRGSIMPIS
SRSVLNHNQQVGGPTGQTSGLGGGGGERGGGGGRSGTMGSPSRSSPSIIGMPKQQQARQP
FSFNRNPGFNMRESLTSNIFNGTDGSENVTGLDLSDFPALADRSRRDGNSNPTPQLNPLA
GRAPYVGMVTKPSSEQSQDFSIHNEDFPALPGPNYQTKDASSNNDDKTNLNSSGKASSSV
DGPKFPGDKSSAPSNNNQQKKGIQVLPDGRVTNIPVGMVTDQFGMIGLLTFIRAAETDPG
MVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLA
AIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTN
AYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctacccggaagaagtttatggagggggggatcgagagcgagtacgcttcg
gacgactccggcctctactatggccacacgtccatgttcgctcctcatcgagccgacaaa
gatatgctgtcgtcttcctcctcaacgagtcagctgtcacagctgggagccagcttatac
gccccacagagtgctctgggcttccctctgcgcgggatcaacagcagcgcagctgcaccg
ctaagtcgaagctcgctgaaccagcctgccagccagctctctggtcacaccagtactccc
aactctggacagctgcacacgcccccctcacccagcagggggtccatcatgcccataagt
agccggagcgtgctgaaccacaaccagcaggtcggcggaccaacggggcagacgagcggg
ttaggaggtgggggaggagagaggggaggcggcggggggaggagcggcaccatggggagt
cccagccggtcgtctccgagcatcatcggcatgcccaaacagcagcaggcgcggcagccg
ttctccttcaacaggaatccaggcttcaacatgagagagtccttaaccagcaacatcttc
aacggcacagacggcagtgagaatgtgacggggttggatctgtcagacttcccggcactg
gcggaccggagccggagagacggaaattcgaatcccacgccgcagctcaacccgctggcc
ggtcgggcgccctacgttggcatggtaaccaagccatccagtgaacagtcacaggacttc
tcgatccataacgaggacttcccagctctcccagggccaaactaccaaacaaaagacgcc
agcagcaacaacgacgacaaaacgaacctgaactcatcggggaaggcctcctccagtgtc
gacggtccgaagtttcctggcgataagagctctgctcccagcaacaacaaccagcagaag
aaagggattcaggtgcttcctgatggccgggtgaccaacattcccgtcggcatggtaacg
gaccagttcgggatgatcggcttgttgacgtttatccgggcggcagagacggatcctggc
atggtccacctggcactgggctcagacctgacgacgctcggcctgaacctcaactcgcct
gagaacctctaccctaagtttgcgtctccgtgggcgtcggcgccttgtcggccgcaggac
atcgacttccacgtcccctcagagtacctaaccaacatccacataagggacaagttagca
gccattaagttgtctcggtacggtgaagatctgctgttttatctctactacatgaacgga
ggagacctgctacaactcctggctgcagtagaactttttaatcgggactggaggtatcat
aaagaggagcgggtttggataacacgggcccctggaatggagcccacgttaaaaaccaac
gcctacgaaagagggacctactacttcttcgattgtctcaactggaggaaggtggctaag
gagtttcatcttgaatatgacaaactagaagagcgaccccacgttccctccactttcaac
tacaatcctgcccagcaggccttctga
DBGET
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