Cyprinodon variegatus (sheepshead minnow): 107089104
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Entry
107089104 CDS
T06110
Name
(RefSeq) ras-related protein Rab-40C-like
KO
K07928
Ras-related protein Rab-40
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107089104
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cvg04031
]
107089104
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
107089104
GTP-binding proteins [BR:
cvg04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
107089104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
107089104
NCBI-ProteinID:
XP_015237154
Ensembl:
ENSCVAG00000018972
UniProt:
A0A3Q2DBF0
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MRGMMGTQTSPVKSYDYLLKFLLVGDSDVGKGEILESLQDGSVESPYAYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNSMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSVANSTASGGSGGGSKANSLKRSKSFKSPQSPPKYSSSSSSSTSSSSKSNCKIS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtatgatgggaactcaaaccagtccagtcaagagctacgattatctcctgaaa
tttctcctggtgggggacagtgacgtcggtaaaggcgaaatcttggagagtttgcaggac
ggatctgttgagtctccatacgcctacagcagtggcattgattacaagaccaccactatt
cttctggacggaagacgggtgaagctggagctatgggatacatctgggcaaggcagattc
tgcaccatcttcaggtcttactctcgtggagcacagggcatcctgcttgtatatgacatc
actaatggctggtcgtttgatgggattgatcgctggatccgggaaattgatgagcacgct
ccaggcgttcccaggatccttgtagggaaccggcttcacctggcctttaagcggcaagtg
cctacagagcaggcgagggcttacgctgaaaagaacagcatgaccttttttgaagtcagc
cctctctgcaacttcaacgttatcgagtccttcactgagctgtcgcgtatcgtgctaatg
agacacgggatggagaaattttggaggcccaacagagtcttcagcctccaggatctctgc
tgcagatcgattgtctcctgcacaccagtgcacctcatcgacaagctgccgcttcccgtt
gcaataaaatcccaccttaagtccttctctatggccaatggcatgaacgccgtcatgatg
catggacgctcgtactcggttgctaacagcacagcttcaggtggcagtggcggtggaagc
aaagccaacagtctcaaacgctcaaagtcctttaaatctcctcagagtccaccaaagtac
tcatcatcctcgtcatcgtccacctcctcctcctccaagagcaactgtaaaatctcatag
DBGET
integrated database retrieval system
