Cyprinodon variegatus (sheepshead minnow): 107089168
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Entry
107089168 CDS
T06110
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107089168
04090 CD molecules [BR:
cvg04090
]
107089168
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
107089168
CD molecules [BR:
cvg04090
]
Proteins
107089168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prominin
Tweety
DUF3587
Fez1
Motif
Other DBs
NCBI-GeneID:
107089168
NCBI-ProteinID:
XP_015237292
Ensembl:
ENSCVAG00000013849
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MWKPGTLLLLSLLWASGELQQETEQRRLPPPGKLDFGYVPAGVYETLAHYEPGPIGILFQ
LVRAFLHAVQPNAFPHDLIVKLAKDKFGAIQTEYKKPENIVLTLQAIYYEIGFLICAAVG
LLFAILMPVVGLFFCMCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFSTSLVITIGVLCA
YAANQNLSSQVKNIRRLVNSNMRDLHTFANDTPMQIDYLISQYATAKNKVIYDLDNIGPL
LGGRIHGQLDKEVHPALNQVLNMAGAMRETKEALENVSVSLVVLQEGERKLHFNLSRIRN
SINRTLDDPGCLDEESDATTAQLCRSIRQSLSQLQISANFTRLPDVNPQLEKMKNVVKTD
LSSVVHRGFYALNDTPHMVIEQTRAVVMSIQNLVGSVGNNITSFSKVFPVQTCLSNFTIF
ISHAHAKIEDYYPEIDQIDFYRWIGCIALCCMVVLVLAFNYLGLLCGTLGYDKHASPTTR
GCISNTGGTLLIAGVGFSFIFSWVLMGLLTAMFLAGGNMEKLLCEPFHTKELFKVVDSPY
LINPEWKNFIPGYLYNDSELELTTESLYSTCKENKGIYSALRLDKVFNISSFLNTTVFTK
DVVRQLESFRIDLRGIILLESEGKQNLQDFSEAGLSEINYADFLEEVNKGVTVVDVVSFA
KELESQTDLMPRGRLQTALKGHVATLQRIHRQQIAPMEQAMKYVRARSALNQSMRFLERT
ASDLPNKVTDVLEAIEAAQHLISHNATLLINQETRKYSATIIGYFNQYIEWVKTSLALEV
APCKPFSNVLDTAQIMTCSFLVDSMNTFWMGLGCSTLFLLPSVILAVKLAKYYRRMDTED
VYDDMEIGNNGYHIESSQGVPNPVMTSVPTYDTMNRFPRASAPPRHIDW
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaacccgggacactgctgctgctgtcgcttctgtgggcgtccggtgaactccag
caggagacggagcaacggaggctaccgcctccgggaaagttggatttcggctacgtgcct
gcgggagtttatgagaccctggcccattacgaacccggacccatagggatcctgttccag
ctggtgcgcgccttcctgcacgcggtgcaacccaacgcgtttccacacgatcttattgtc
aagctggcaaaggacaagtttggagccattcaaaccgaatataaaaagccagagaatata
gtgctgaccttgcaggccatctactatgagataggcttcctcatatgtgcagcggtgggc
ctgctgttcgccatcctcatgccagttgtggggctcttcttctgcatgtgtcgctgctgc
gacaactgtggcggcgagatgcaccaacgccagaggaagaatgcggactgccggcgtggc
ctgctggggacattactcttttccacctcattggtcatcacgattggtgttctgtgtgca
tatgcagccaaccagaacctgagttctcaggtgaagaacatacggcggctggtcaacagc
aacatgagagaccttcacacctttgctaacgacacaccaatgcaaatcgattacctaata
tcccaatacgccaccgccaagaacaaagtcatctacgacctagataacataggtccatta
ctgggtggaaggatacatggacaattggataaggaggttcatcctgctttaaaccaagtg
cttaatatggctggagccatgagagaaaccaaagaggccctggagaacgtcagtgtttct
ctggtggtcttgcaggaaggagaaagaaaacttcatttcaacctgagccgaatccgcaac
agcatcaaccgtaccctcgatgaccctggctgccttgatgaagaatcggacgccaccaca
gcccagctttgccgcagcatccgccagtctttgtcccagctgcagattagtgcaaatttc
acccggctccctgatgtgaaccctcaactggaaaagatgaaaaatgttgtgaaaacagat
ctcagctctgttgtccacaggggcttctatgctttgaatgacaccccacacatggtcatt
gaacagaccagagctgttgtcatgagcatacagaatttggtgggcagcgtcggtaacaac
atcaccagtttctccaaagtttttccagtgcagacatgcctgtccaacttcaccatcttc
atcagccatgcacacgccaaaattgaagattactatcctgaaattgatcaaatagatttc
tacagatggattggctgtattgctctgtgctgcatggtggttctggtcttggcctttaac
tatttgggccttctgtgtggcactctgggatacgacaagcatgcctcacctacaacacgg
ggatgtatatccaatacaggaggaacactgctcatagccggcgttggatttagtttcatt
ttctcctgggtgctgatggggctgttgactgccatgttcctggcaggaggaaacatggag
aaactcctctgtgagccgttccacaccaaagagctcttcaaggtcgtggacagtccgtat
ttgatcaacccagagtggaagaatttcatccctggctacctgtataatgactctgaatta
gagctgacgacagaaagcttgtacagcacttgcaaagagaacaaaggcatctactctgcc
ctccgcctggacaaagtcttcaacatctcctcattccttaacactacagtgttcactaag
gatgtggtgcgccagctggagagcttccggatcgacctgagaggaataatcttgttagag
tcagaggggaagcaaaacctccaagatttctctgaagcaggcctgtcagagattaactac
gcggacttccttgaagaggttaataaaggtgtcactgtggtggatgttgtctcgttcgcc
aaagagctggagtcccagacagacctgatgcccaggggacgtctgcagacagctctgaaa
ggccatgtggccactcttcagcggatccacagacaacagatagctccaatggagcaagcc
atgaaatatgttagagcaaggagtgcattaaaccagagtatgagatttctggagaggaca
gcctctgatctaccaaataaagtaacagatgttcttgaggccattgaagcagctcagcac
cttatctctcacaatgcaacacttttgatcaatcaggaaacaagaaagtattcagcaacc
attattggctattttaatcaatacatagaatgggtcaaaacatcattggctttggaggtc
gcaccatgcaagcctttcagcaacgtgttggatacagcgcagatcatgacctgtagtttc
ttggtggattcaatgaacactttctggatgggtctgggctgcagcactctatttttgctc
ccaagtgtaatactagcggtgaaactagccaagtactaccgcaggatggacacggaggac
gtctacgatgatatggaaattggtaataatggttatcatattgagagttcacaaggtgtt
cctaaccctgtgatgacaagcgttcctacatatgatacaatgaacaggttcccacgagcc
tcggcacctccgaggcacatcgactggtga
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