Cyprinodon variegatus (sheepshead minnow): 107089220
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Entry
107089220 CDS
T06110
Symbol
cpt1b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, muscle isoform isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00071
Fatty acid degradation
cvg01212
Fatty acid metabolism
cvg03320
PPAR signaling pathway
cvg04148
Efferocytosis
cvg04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
107089220 (cpt1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107089220 (cpt1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107089220 (cpt1b)
03320 PPAR signaling pathway
107089220 (cpt1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cvg03029
]
107089220 (cpt1b)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
107089220 (cpt1b)
Mitochondrial biogenesis [BR:
cvg03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
107089220 (cpt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
107089220
NCBI-ProteinID:
XP_015237363
Ensembl:
ENSCVAG00000012306
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MAEAHQAVGFQFTVRPDGVDLKLSQEVLKNIYLSGVTAWKKKAIQFKNGILTGVYPASPS
SWLIVVIAMMSSLYTHIDPSLGMIDAIKENLPYKVYMQVQTRAVVSAILFATGVWLFFIY
LMRFTLKTLLSYHGWIFESHGKMSTCTKLWLSLVKMISGRRPLLYSFQAALPRLPVPRVD
DTIQRYLESVRPLLDSKQYNRMEILANEFKETESTQLQRYLILKSWWATNYVSDWWEEYI
YLRSRGPIMVNSNFYIMDLLYMTPTHRQAARAGNVVHAMLQYRRKLERGEHAPLRALGTV
PMCSTQMERMFNTTRIPGIETDIVQHLTDRKHLIVYHKGRFFQVWLYIGGRHLLPSELET
QFQRILNDPSEPQPGELKLAALTAGARVPWARARLKYFGHGINKISLDAIESAAFFLTLD
EEPQGYDPAKVNSLDIYAKSLLHGKCYDRWFDKSFNLISYPNGKIGVNIEHSWADAPIVG
HMWEYVLATDCFHLGYTEEGHCKGDMNRGLPCPTRLQFQISDECQDVIETSYLLARQLAD
DVDFNCYLFSEFGKGLIKKCRTSPDAFIQLALQLAQFRDQSVFCLTYESSMTRMFRDGRT
ETVRSCTSEAVAFVRAMEDPCATNAVRLALFRKAAEKHQNMYRLAMTGSGIDRHLFCLYI
VSKYLGVESPFLKKVLSEPWKLSTSQTPQQQLNLVDINKFPKYVGAGGGFGPVADDGYGV
SYIIVGENLITFHISSKFSCPDSVRIVFIPWRPFIVSLQV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggctcatcaggcagtgggctttcagttcacagtgcgcccagatggtgtggac
ctgaagctgagtcaggaagttttaaaaaacatctacctgtcaggagtgactgcctggaag
aagaaagccattcaattcaagaatggaatactgactggagtttaccctgccagtccttcc
agttggctgatagttgtgattgctatgatgagctccttatacactcacatagacccctct
ctgggaatgatagacgccataaaggagaatcttccatacaaagtctacatgcaagtgcag
accagagcagttgtgagtgccatcctgtttgccacaggagtctggctgtttttcatctat
ctcatgagattcactctgaagactcttctttcctaccatggatggatttttgaatcccat
ggaaaaatgagcacatgtacaaaactgtggctgagcctggtaaagatgatttctggacga
aggcccctgctctacagtttccaggctgccttacccagactccctgtccccagagtggat
gataccattcagaggtatctagaatcagttcgccctctgctggatagcaaacagtacaac
cgaatggagattctggcaaatgaattcaaagaaactgagtcaacgcagctccagaggtac
ctcatcctgaaatcttggtgggcaacaaactatgtaagtgactggtgggaggaatacatc
tacctgaggagcagaggtcccatcatggtcaacagcaacttttacatcatggacctcttg
tatatgaccccaacacaccggcaggctgctcgggcaggaaatgtggttcatgccatgctg
cagtacaggcgtaagctggagcgcggggaacatgcaccgctgagggctttagggacggtt
ccaatgtgctccacccagatggagagaatgtttaacaccactcgtatccctggtatagaa
acagatattgtgcagcacctgacagaccgaaagcacctaatcgtctaccacaaagggcgc
ttcttccaagtgtggttgtatatcggggggcgccacctcttacccagtgagctggagacc
cagtttcaaaggattctcaatgatccatcagaaccacagccaggagaactgaaacttgca
gctcttactgcaggagcccgggttccttgggcacgggctcggttgaaatactttggccat
ggaataaacaaaatttccctggatgctattgaatctgctgcattcttcctgacacttgat
gaggaaccacagggttatgacccagcaaaggttaactcacttgatatttacgccaagtcc
ctgctgcatggtaaatgttatgacaggtggttcgacaagtctttcaacttaatctcatac
ccaaatggaaagataggagtcaatattgagcactcttgggcagatgcccccattgttgga
cacatgtgggagtatgttcttgcaacagactgctttcacctgggctacacagaggagggc
cactgcaaaggggacatgaacaggggccttccatgtccgactcgattacagtttcagatt
tcagacgagtgccaagacgttattgaaacttcctacctattagccaggcagctagccgat
gacgtggactttaactgctatttgttctctgagtttggaaaaggcctgatcaagaagtgc
aggacgagccctgatgccttcattcagctggctctgcagctggcacagttcagggaccag
agcgtgttctgcctgacatacgagtcctcgatgacccgtatgttcagagacggtcggaca
gagacggtgcgttcctgcacctctgaggcagttgcttttgtccgggccatggaagatcca
tgtgcaacaaatgctgtcagacttgcattgtttcggaaggcagcagaaaagcatcagaat
atgtaccgtctggccatgactggatctggcatcgatcggcacctcttctgcctttacata
gtgtctaaatacctcggtgtagaatcaccatttctcaaaaaggtgctttcagagccgtgg
aaactgtcgaccagccagactcctcagcagcagcttaatttagttgatattaacaagttc
cctaaatatgtgggtgcaggaggtggatttggcccagtggccgatgatggctatggtgtg
tcttatatcattgttggcgaaaatctcatcacattccatatctccagcaagttctcatgt
cctgactcagtaaggattgttttcatcccctggagacccttcattgtgtctctccaagtt
taa
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