Cyprinodon variegatus (sheepshead minnow): 107089230
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Entry
107089230 CDS
T06110
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04371
Apelin signaling pathway
cvg04514
Cell adhesion molecules
cvg04520
Adherens junction
cvg05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
107089230
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107089230
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107089230
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107089230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107089230
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107089230
04090 CD molecules [BR:
cvg04090
]
107089230
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
107089230
Cell adhesion molecules [BR:
cvg04515
]
Cadherins
Major cadherins
107089230
CD molecules [BR:
cvg04090
]
Proteins
107089230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
107089230
NCBI-ProteinID:
XP_015237378
Ensembl:
ENSCVAG00000011193
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
TQEEAVPFLQLSWRPLIAGGLNRMKREWVIPHINFAENDRGPYPKYMVEIKSSKARKVAI
TYKITGPGADEPPEGIFTIDERSGAMYVTQALDREKKARYKLWAHALLEKENAEQPMELI
INVIDQNDNSPEFNTSVLTGRVSESADVDEPVLKVTAEDKDDPTTKNAIIRYRIKSQTPT
MPKEEMFAINAVSGVVRLKEGGLDRETHPEYKLIIQAADMEGEGRTATCTAVIIITDSND
NAPKFTESSMTTSVYENAIGVEVARLKVTDMDEAGSPNSNTKYSIIKGNEGGAFNITVGP
NKMEGIITTAKELDFEGLSVYKLLVVVTNEAPFSLPVPTATATVTVNVIDRNEAPVFSPA
EVQVTLSEDMKTDTSVVELKAKDPDTARKQQVRYKLLNDTARWLSNNSSTGLVQIARSMD
RESRYVIDNKYTVLILAYDDDIIPATGTGTLVVSLLDVNDHFPVIKQRKAILCNTDPLPA
LLDIVDLDGPGHAGPFTVELIAGHKTNWTVKINHTSHVVSLYPKRDLPPGDYNVLMRVYD
VEMHFQDSRVAVEVCHCQGVVDACFMPLDDRRSSIPSFATPLLGTVFGVLLLLLILLLLL
RKRRDGGKKEPLLELERDDIFCYSEEGGGEDDKEYDLSQLHRGLDHRPEVFSTDVFPTIQ
TRPQYRLQIQANEEIGKFIEYNLQAANGDPTAPPYDSLLVFDYEGGGSEADSLSSIQSSD
SDEEQDFQSLAQWGPRFSRLTDLYTGGIEEEDDDDQTLPGKTEWV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
acacaggaggaggctgtcccctttctccagctgtcgtggcgtccactgattgcaggcggt
ctgaaccggatgaagagggagtgggttattcctcacataaactttgcagaaaatgaccgg
ggtccataccccaaatatatggtggagatcaagtccagcaaagccagaaaagtagccata
acttataagatcaccggcccgggagcagatgagccccctgagggtatctttaccattgat
gaacggtctggtgcgatgtatgtgacccaggcactcgacagggagaaaaaagccagatac
aaactctgggctcatgccttgttagagaaagagaatgcagagcagcccatggagctcatc
atcaatgttattgaccaaaatgacaactccccagaattcaacacaagcgtcctcactggc
agagtgagcgaaagtgctgacgttgatgaacctgtcttaaaggtaacagcagaagataag
gatgatccaacaacaaaaaatgccataattagatatcgaataaaatctcaaacgcctaca
atgcccaaagaggaaatgtttgccataaatgcagtgagtggagtggtccgtctgaaggag
ggaggactagacagagagactcacccagaatacaagctgatcatacaagctgcagatatg
gagggggaagggcggactgcaacctgcactgctgtcattatcatcactgacagcaacgat
aatgctccaaaatttaccgaatcatctatgaccacatcagtctatgaaaacgcaatagga
gtggaggtagcaaggctgaaggtcactgacatggatgaggcaggatctccaaattccaac
accaaatactccatcatcaaaggcaatgaaggtggagcctttaacatcactgttggccca
aataagatggagggaataatcactactgccaaggagctggattttgagggactatctgtt
tacaagctgttggtggtggtgacaaatgaggcaccattttctctccctgtccccactgca
acagccaccgtcacagtgaatgtcattgacaggaacgaggctcctgttttcagcccagct
gaggtgcaggtaacactctcggaggacatgaaaactgacacttctgtggtcgaactcaaa
gctaaggacccagacacagccagaaaacagcaagtaagatacaaactcttaaatgacact
gccaggtggctgagcaacaactccagcactggattggtccaaattgcaagaagcatggac
agagagtcgcgatacgtcatagacaacaaatataccgttttaattttggcatatgatgat
gatataattccagctacaggaactggtactctggtggtgagcttgttggatgtgaatgac
catttccctgtcatcaagcagaggaaagcaattctgtgcaacactgaccctttgcctgca
ctcctggatatagtggacctggatggaccgggtcatgctggaccgtttactgtggagctt
atagcagggcataaaacgaactggactgttaaaatcaatcacacaagccatgttgtatct
ctttaccccaaacgagacctacctcctggagactataacgttctcatgagggtttatgat
gttgaaatgcacttccaagacagtagggtggccgtagaggtgtgccactgtcaaggagtg
gtggatgcctgcttcatgccactcgatgacagacgttcaagcattccctcttttgcaact
cctcttctagggactgtttttggtgttctattgctgctcctgatacttctgttgctgttg
agaaaaaggagggatggaggaaagaaggagcctcttcttgagttggaacgtgatgacatc
ttctgctacagcgaggagggaggaggtgaagacgacaaggagtatgatctgtcacagttg
cacagaggcctggaccatcgacctgaggtcttcagtacggatgtttttcctactatccag
actcgaccgcaatatcgtttacagatccaagccaatgaggaaatcggaaaatttattgaa
tacaacctgcaagctgccaacggtgatcccacagctcctccctatgattctctccttgtg
tttgactatgagggtggaggctctgaggcggattctctcagctccattcagtcctcagac
tcagatgaggagcaggacttccagagcttggctcagtgggggccacgcttcagcagactg
acagacctgtacactgggggcatagaggaggaagatgatgacgaccaaacactgccagga
aaaacagaatgggtttaa
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