Cyprinodon variegatus (sheepshead minnow): 107089298
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Entry
107089298 CDS
T06110
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107089298
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107089298
Ion channels [BR:
cvg04040
]
Ligand-gated channels
Serotonin (5-HT3)
107089298
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7896
Motif
Other DBs
NCBI-GeneID:
107089298
NCBI-ProteinID:
XP_015237493
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MAGNIDISVMAHPRPEIFLQIFEKVRENEVDVPENCSSQSVLEHLNLTQNSDKYTVERPV
RHYNHLTWVLLEMKIYAILDLRETDQTFIAYIWVYLRWDNEFLWWYPEHFCGIEHILVPT
KFLWMPDLTIVEKTEADKASPSPYLNIRSHGWVEYRNDQVVVSTCKMHVYRFPFDRQSCN
ISFKSIMYSDEEIELFYNANSTEITEWSRKVMRTQYEWLFDSMTVTGMTVNDFGFNQTMV
VYTINMKRSAVLYTANFLLPVIFFFCLDFASMLMSDTSGEKIGFKVTIMLAVTVMQLILN
DILPSSSARIPLIAVYCIGTFALMLLSLLETILVIYLIDKDASQVAEMEKTKWQVEDQQE
KLTDFPTCFIGLQKCSNCTSAKKASIYCSPVTEKEGGRGENTEVSIALEKMSDDLGEIKK
SITLLSGRQEDAKPGYWTRIANKINKAFAIFYFTAATLFLGIVFTMWFKEDA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaatattgatattagtgtaatggcacacccaaggccagaaatttttcttcag
atctttgaaaaagtacgagaaaatgaggttgatgtcccagagaactgcagttctcaatct
gttttagagcacttgaatctgacccagaacagtgacaagtacactgtggagcggcctgta
agacactacaatcatttgacatgggtgctacttgagatgaagatttatgctattctagat
ctgagagaaactgaccagacatttatcgcttatatttgggtttacttgagatgggacaat
gagttcctctggtggtacccagaacatttctgtggaattgaacatatcttggtccctact
aaatttttgtggatgccagatctcactattgtagagaagacagaggcagacaaagcctct
ccaagcccttatcttaacatccggagccatggctgggttgaatatagaaatgaccaggtg
gtggtcagcacatgcaagatgcatgtttacagattcccatttgacagacagagctgcaac
atctcttttaagtcaattatgtactcagatgaagaaattgagttattctacaatgcaaac
agtacagaaatcacagagtggtcacgaaaagtaatgcggacgcagtacgagtggcttttt
gacagcatgacagtcacagggatgactgtcaacgattttggcttcaatcaaacaatggtc
gtatacacaataaacatgaagaggagcgctgtcctgtatactgcaaacttcttgctgcct
gttattttctttttttgtctggactttgcctccatgctgatgtcagataccagtggtgag
aagattggcttcaaagtcaccataatgcttgcagtgactgtgatgcagcttattctcaac
gatattcttccatcttcctctgctaggattcctctaatagcggtttactgcattgggact
tttgctctaatgctgctcagcctcttggaaacaattttggtgatttatctgattgataaa
gatgcatcccaggttgctgaaatggaaaagacaaaatggcaggttgaagaccaacaggag
aaactgactgactttccaacctgctttatagggctccagaaatgtagtaactgtacatct
gcaaagaaagcatctatttattgttcaccagttactgaaaaagagggtggcaggggtgaa
aatactgaagtgtccattgcactagaaaagatgtcagacgacctcggagagatcaagaaa
tcaataactcttctcagtggcagacaggaagatgcaaagcctggctactggaccagaatt
gctaacaaaataaacaaagcttttgcgattttttatttcacagcagcaaccctgttttta
gggatagtttttacaatgtggtttaaagaagatgcctag
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