Cyprinodon variegatus (sheepshead minnow): 107089299
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Entry
107089299 CDS
T06110
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107089299
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107089299
Ion channels [BR:
cvg04040
]
Ligand-gated channels
Serotonin (5-HT3)
107089299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
MamF_MmsF
Tetraspanin
LPD28
Yip1
HTH_61
AAA_22
Motif
Other DBs
NCBI-GeneID:
107089299
NCBI-ProteinID:
XP_015237509
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MTCTTFLLLVLILTNGGFCKVCSYQDVLDYLNLTADSSLFKITRPVLDHTHITVVKLDLI
VYAILAVVEKTQTFVPFIWGSMQWKNELISWDPAQFCGITQTSVPRDLLWKPDLFIYEMI
EKDNSPGNPNVVVNFDGTVIAGDDIRVVSTCKMDVYKFPFDTQQCNISLGSGVYCINEMR
IIPYSNSSRVTEFSQEIMKTQGEWEFLHLTVSNSTHTHENRSWDVLTYTVTIKRRPLLHV
INFLLPILFFLILDFASFFISDHRGEKLGFKVTVLLAISVLLLILNEILPAMSNKTPLIA
TYCIVIFALMLVSLLETILVTYLIEKDEIRSQETKKKKLNNTNTNNDEKGDEKRVVCNSI
CRESEKDNQHELLPALEEVYSSLQSEESRMLLLILDELQKLQKKVYIHLGGRDEKMKFVS
WAKRINRYFFVCYTITISLFLFLIWREWKS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacctgtactacctttctcctgctggtgctcatcctgacaaatggcgggttctgtaaa
gtgtgcagttatcaggatgttctggactacctgaacctgaccgcagacagcagcttgttt
aaaataacccggcccgttctggaccacacacacatcactgtggtgaagctggaccttatc
gtctatgccatcctggcagtggttgaaaaaacacaaacctttgttcctttcatctgggga
tcaatgcagtggaagaatgaactcatctcatgggatccagctcagttttgtggaatcact
cagacttcagttcctagagacctgctctggaaaccagatctcttcatctatgagatgata
gagaaggacaactccccaggaaatccaaatgtagttgtgaattttgacggaacggtcatt
gctggcgatgacatccgcgtggttagcacctgcaagatggacgtctacaagttccccttt
gacactcaacaatgcaacatatccctcggttctggagtatactgcataaacgaaatgcga
attattccctattcaaactcctctcgggtcactgagttttcacaggagatcatgaagacc
caaggagagtgggagttccttcatctgactgtcagcaactccactcatactcatgaaaac
aggagctgggatgtgctgacatacacagtcaccataaagagaaggcccctcctccatgtc
ataaatttcttattgcccatcctattctttcttattctggatttcgcctccttttttatc
tcggaccatcgtggggagaagctaggctttaaagtaacagttctgttagccatctctgtc
ctcctcctcatcctcaatgaaatcctgccggccatgtccaacaagactccactgatagca
acctattgcatcgtgatttttgctctgatgttggtgagccttttggagacgatcctggtc
acctatctgattgaaaaagatgagatccgttcccaggagacaaaaaagaaaaaacttaac
aataccaacactaataacgatgaaaaaggagatgagaagcgtgttgtctgtaacagcatc
tgcagagagtcagagaaagataatcagcatgagcttcttcctgcacttgaagaggtttac
agcagccttcagtcagaagagtctcgcatgctgctcttgatcctggacgagctgcagaag
ctgcagaaaaaagtttacattcatctgggcggcagagatgagaaaatgaaatttgtgtcc
tgggccaaaaggatcaacagatatttctttgtttgctacaccatcaccatttccctcttt
ctgttcctcatctggagagaatggaaatcctag
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