Cyprinodon variegatus (sheepshead minnow): 107089324
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Entry
107089324 CDS
T06110
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107089324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107089324
Ion channels [BR:
cvg04040
]
Ligand-gated channels
Serotonin (5-HT3)
107089324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
107089324
NCBI-ProteinID:
XP_015237538
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MVPALICFLLFLSAGFISSYQDDGDNQTTSNKSNVDSPEKICSYWDILQNLSSGSMAQEK
AKYTMTRPVTNSKTKTIVRIEMAIFSILDLKEEDQSFIAYVWFLMEWNNEYIHWNLEDFC
GIEYVQVPREALWMPDITIEEMIEKDKAPISPFLYVAHNGTVGYRDDKVVKTTCKMHIYY
FPFDTQSCNISFKSVSYADYQLTLDPITKNEFNTNLSMNTIQMKYEWEFLNISVRRKEDK
IFNYDQDIIVYTVTMRRKSTLYVVNFLLPVLFFWCLDVASILMSNGGGEKISFKVTVLLA
VTVMQLILIEILPFTTSKIPLIVIYCIGIFSIMLLSLLETIWVNYLMEKDSHDDGQIESD
NKPIKASSIEMMDQTTSMYQRGGSSQLTGLLEKISIELREIKTTLHGKKTKQKGGYWTRV
AKKIDKIFSTVYILGVLLFLIIIFSEWQSQLKRH
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggttcctgcattgatctgttttctgctcttcctttcagcgggattcatttccagttac
caagatgatggtgacaaccagacgacatccaataagagcaacgttgattcgccagaaaaa
atttgcagctactgggatattctgcagaacctctcttctggcagtatggcacaggaaaaa
gccaagtataccatgaccagacctgtcacaaattctaaaacaaagactatagttcgcatt
gagatggctatcttttccattctggatctgaaagaagaagatcaatccttcatagcatat
gtttggtttttaatggaatggaataatgaatatattcactggaacttagaggacttttgt
ggcatagaatatgtacaagttccacgcgaagctttatggatgcctgacatcactattgaa
gaaatgatagaaaaggataaagccccaataagcccttttctctacgttgctcataatggg
actgtaggatacagggatgataaagttgtgaagaccacctgcaagatgcatatttattac
ttcccctttgacactcagagctgcaatatttcctttaagtctgtctcgtatgctgattac
caattaacccttgatcccattacaaaaaatgaatttaataccaatttgtctatgaataca
atccagatgaagtatgagtgggagtttctcaatatctcagtccgccgcaaagaagacaaa
atttttaactatgatcaagatatcattgtctacactgtaaccatgaggagaaagtctaca
ctgtatgttgtcaactttttgctgcctgtcctcttcttctggtgtctggatgttgcctcg
atcctgatgtcaaacggtggtggggagaagattagcttcaaagtaaccgtactacttgcc
gttacagtgatgcagcttattctcattgaaattttaccttttaccacaagcaagatccca
cttatagtgatttactgcatcgggatattttcaataatgctgctaagcctcttggagaca
atttgggtgaattatctgatggagaaagactcacacgatgatggccagatagagagtgac
aacaaaccaataaaggcctcttccattgagatgatggatcaaacaacatctatgtaccaa
aggggtggaagcagccaactgactgggctcctggaaaaaatctcaattgagcttagagag
ataaaaacaactttacatggcaaaaaaacaaaacagaagggtggttactggaccagagtt
gccaaaaaaatagacaagatcttttctactgtatatatcttaggagtccttctgttttta
attatcatcttctcagagtggcagtcacaattaaagagacactaa
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