KEGG   Cyprinodon variegatus (sheepshead minnow): 107089363
Entry
107089363         CDS       T06110                                 
Symbol
nle1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cvg03009]
    107089363 (nle1)
Ribosome biogenesis [BR:cvg03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    107089363 (nle1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 DSE1_N Beta-prop_Aladin Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st ASA1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_WDR41 NLE NBCH_WD40 WD40_MABP1-WDR62_1st CFAP251_N Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Tricorn_2nd PAC11 TRM82_WD Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_SPT8 eIF2A Ge1_WD40 PD40 RMC1_N Beta-prop_RIG_1st Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C WDR54 Cytochrom_D1
Other DBs
NCBI-GeneID: 107089363
NCBI-ProteinID: XP_015237593
Ensembl: ENSCVAG00000005825
UniProt: A0A3Q2FJF5
LinkDB
Position
Unknown
AA seq 478 aa
MMSEDVERLLIQFQDENGEVLGSPFDVPLDITPDKLQLVCNALLQKEEPVPLAFFVRGEA
EVVSSLGSCIKALGVETEQVLPVVYQPQAVFRVRAVTRCTSTLQGHTEAVISTAFSPTGK
YLASGSGDTTVRFWDLTTETPHHTARGHTHWVLSIAWSPDGKKLASGCKNSQIFLWDPVT
GAQIGKTLTGHTKWITWLCWEPLHLNPECRYLASSSKDCSIRIWDTVLGRYDKILTGHTQ
SVTCVKWGGDGLLYTSSQDRTIKVWRPKDGILCRTLQGHAHWVNTLALSTDYVLRTGAFE
PATATINPQDLTGSLDEIKERALQRYNKVRGSAPERLVSGSDDFTLFLWNPAEDKKPLAR
MTGHSALVNEVLFSPDTRLLASASFDKSIKIWDGRTGKYLMSLRGHVGSVYQVAWSADSR
LLVSGSSDSTLKVWDVKTGKLNMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgatgagtgaagatgtggagcggctgctgatccagtttcaggatgagaatggagaggtt
ctgggttctccttttgatgtgcctcttgacatcaccccagacaaactgcagctagtctgc
aatgcactgctgcaaaaggaggagcctgtgcctctggcattttttgtgcgtggagaggca
gaggtggtgtccagtcttggatcctgtattaaggctctcggggtggagacggagcaggtt
ctgccagtggtgtaccaacctcaggctgtgttccgggttcgggccgtgacccgctgcacc
agcacgctgcagggacacacagaggcagtgatctccactgcttttagtcctacgggaaag
tatctggccagcggatcaggagacaccacagtgcgcttttgggacctgacaactgagacg
ccccatcacacagccagaggacacacccactgggtccttagcatcgcctggtcacctgat
ggaaagaagttggcctcaggttgcaagaacagtcagatctttctctgggatccagtgacg
ggggcacagataggaaaaactttgacaggacacaccaagtggatcacttggctctgctgg
gaacctctccatcttaacccagagtgcagatacctggccagcagctctaaggattgctct
atacgtatctgggacactgttctggggcgctatgataagatcttgacgggacacactcag
tcagtcacctgtgtgaaatggggaggagacggacttctatacacttcctctcaggaccgc
accatcaaagtctggaggccaaaagatggcatcctgtgcaggactctgcagggtcacgcc
cactgggtgaacaccctggctctcagcacagattacgtcctgcgtactggagcttttgaa
cctgctacagccactatcaacccccaggatctcactggatctttggatgagataaaggaa
agagccttgcaaagatacaataaagttagggggtccgctccggagcggttggtgtcaggc
tctgatgatttcaccctgttcctgtggaatcccgctgaggataaaaagcctttagccagg
atgaccggccacagcgctctggtcaacgaagtgctcttctcccctgacaccaggctactg
gcttcagcttcatttgataagtcaattaaaatctgggatggacggactggaaagtacctg
atgtctctgcgtggccatgtgggatccgtgtatcaggtggcgtggtcggcagacagcagg
ctgctggtcagtggcagcagtgacagcacgctcaaagtgtgggacgtaaaaactgggaag
cttaacatggaccttcctggccacgctgatgaggtttatgctgtggactggagtcctgat
ggacagagagtagcaagtggagggaaagacaaatgtcttcgaatatggagaagatag

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