Cyprinodon variegatus (sheepshead minnow): 107089389
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Entry
107089389 CDS
T06110
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107089389
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107089389
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107089389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
107089389
NCBI-ProteinID:
XP_015237631
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MAENDVDNELLDYEEDDEPQGLPESGPPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIG
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQWDGGRVVS
LPADCVSVIGTVDESSHSLLTVSLLLGRGTVDESSHSLLTVSLLLSSVRMFLSRLSRYQQ
FKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVS
DETDAKTLNEVQDRFEVNVAELPEEIDISSYKLSHIFDLNIRGIAEAIFHCMDRMWVSPP
LFPSQPSAVLCSLAEMDCSITVTRCVTVNLNPC
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgatgttgataacgagcttctggactacgaggaggatgacgagccccag
ggcctcccagagagcggccccccggccaacaagaaggaggtgaaaggatcctacgtatcc
attcacagctcaggattcagagactttctgctcaaaccagagctgctgcgcgccatcggt
gactgcggcttcgaacatccttcagaagttcaacatgagtgcattcctcaagctatcctg
gggatggatattctctgtcaggccaagtctggcatgggaaagacggccgtgttcgtgtta
gcaacgctgcagcaaattgaacctgtggacggccagtgggacggtggacgagttgtctca
ctccctgctgactgtgtctctgttattgggacggtggacgagtcgtctcactccctgctg
accgtgtctctgttattgggacgtgggacagtggacgagtcgtctcactccctgctgacc
gtgtctctgttactttcctcagtacggatgtttctctccaggttatctcgctaccagcag
tttaaagacttccagaggcggatcctggtggccactaatctgttcggccgaggcatggac
atcgagagggtcaacattgtcttcaactatgacatgcccgaggactcggacacgtacctt
cacagagtagcgcgtgccggaaggtttgggaccaaaggcctcgccatcacttttgtctca
gacgaaacagacgccaagactctgaatgaagtccaagaccgcttcgaggtgaatgtagcc
gagctgcctgaggagatcgatatctcctcctacaagctttctcacatctttgacctgaac
atcagaggcattgctgaggcaatctttcactgcatggacaggatgtgggtcagtccgcct
ctattcccttcacagccctccgccgttctctgcagcctggctgagatggactgctccatc
actgtcaccaggtgtgtcactgtaaatctgaatccgtgttaa
DBGET
integrated database retrieval system
