Cyprinodon variegatus (sheepshead minnow): 107089456
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Entry
107089456 CDS
T06110
Symbol
vcl
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510
Focal adhesion
cvg04520
Adherens junction
cvg04810
Regulation of actin cytoskeleton
cvg04820
Cytoskeleton in muscle cells
cvg05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107089456 (vcl)
04520 Adherens junction
107089456 (vcl)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107089456 (vcl)
04810 Regulation of actin cytoskeleton
107089456 (vcl)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107089456 (vcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107089456 (vcl)
04147 Exosome [BR:
cvg04147
]
107089456 (vcl)
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107089456 (vcl)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107089456 (vcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
107089456
NCBI-ProteinID:
XP_015237747
Ensembl:
ENSCVAG00000022238
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLSAPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLSVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKKDTEAMKRALGLIDSKMGQAKNWLRDPNAPPGEAGEQAV
RQILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSEMRARGQGASPAAMQKAQQVSHG
LDVLTGKVENAARKLEAMTNSKQAIAKRIDAAQSWLADPHGGPEGEENIKALLGEAKKIA
DMCEDPKEREEILRSAGELAAMTAKLSELRRQGKGDTPEARALAKQIATALQNLQSKTNK
AVANSRPAKAAVHLEGKTEQAQRWIDNPTVDDSGVGQAAIRGLVAEGRRLANALQGPYRQ
ELMGKCEQVEQLMAQLADLAARGEGDSPQARAVAQQLQETLKDLKGKMQEAMTQEVSDIF
SDTTTPIKLLAVAATAPLDAPNRDEVFDDRANNFENHANRLGATAEKAAAVGTANKNTVE
GIQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEDAIKKDLDKCRVAMTNHQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REMVKAASDELSQTISPMVMNAKAVAGNIQDPNLQKSFLDSGFKILGAVAKVREAFQPQE
PDFPPPPPELDQLNLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEHKAGEKVNEPIM
VAARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASD
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGCTLHWVRKTPWYQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccggttttccacacgaagaccatagaaagtatcctggagccggtggctcagcagata
tcccatctggtaataatgcacgaggaaggtgaagttgacggaaaggctatcccggacctg
tctgcgccggtggctgctgttcaggcggccgttagcaacctcgttagggttggaaaggat
actgtgcaaacaacagaggaccagatcatgaaaagggatatgcccccagcctttatcaaa
gtggagaatgcctgtacaaagctggttcaagctgcttccatgctgaaagccgacccatac
tctgttccggctcgggattacctcatcgatggttcccggggcattctgtctgggacgtct
gacctgctcctgacttttgatgaggcagaggtccgcaaaataatccgtgtatgcaaaggc
atcttggagtatctgagtgtggcagaggtggtggagtccatggaggatctgatcacatac
acaaagaatctgggaccagggatgaccaagatggcgaagatgatagatgagcgccagcag
gagctgacacatcaggaacatcgtgtgatgcttgttaactcgatgaacacggtcaaagag
ctgctgcccatcctcatatcaggtataaaaatctttgttacaaccaagacatctgggagc
cagggtgtcgaggaggccctgaagaaccgaaacttcacgtttgagaagatgagtgctgag
ataaatgagatcatccgagtgctgcagcttacatcctgggatgaagatgcttgggccaat
aagaaggacacagaggccatgaagagggctctaggactgatcgactccaaaatgggtcag
gctaaaaactggctgagggatccaaatgctccaccaggggaggctggcgagcaggccgtc
cggcagatcctggatgaagctggtaaagttggtgagctgtgtgccgggaaggagcgcaga
gacatcctgggcacggccaagactctgggccagatgactgatcaggtgtctgagatgagg
gcgagaggtcagggagcatctccggctgccatgcagaaagcgcagcaggtttcccatggc
ctggatgtgctcactggcaaggttgaaaacgccgctcgcaaactcgaggccatgacgaac
tccaagcaggccatcgccaagaggatcgatgctgcacagagctggctcgcagacccccac
ggtggcccagagggagaggagaatatcaaggccctcctgggtgaggccaaaaagattgcg
gatatgtgcgaggatcccaaagagcgggaagagattttgcgctctgctggagagctggct
gccatgacggccaaactgtctgagctcagaaggcagggtaaaggtgacactcctgaggcc
cgagccttagccaagcagatagcaacagccctgcagaacctgcagtccaagaccaacaag
gctgtagccaacagcaggcctgcaaaggcagccgttcacttggaggggaagacggagcag
gcgcagcgctggatcgacaaccctactgtggacgacagtggtgtaggccaggcagccatc
cgtggcctggtggcagagggccgtcggctagccaatgctctacagggtccgtacaggcag
gagctgatgggcaagtgtgagcaagtggagcagctcatggcccagctggctgacctggct
gcccgtggcgaaggggactccccgcaagcacgtgctgtagctcaacagctccaagagacc
ttgaaagacctgaaaggaaagatgcaggaggccatgactcaggaggtttctgacatcttc
agtgacaccaccacccctatcaagttactggcagtggctgctacagccccccttgatgca
cccaacagagatgaggtctttgatgatagagccaataacttcgagaaccatgccaacagg
cttggtgctacggccgagaaggcagccgcagtcggcacagcaaacaagaacacggtggag
ggaatccaggctgccgtcaagtcaaccagagacctaacaccacaagtggtctctgctgct
cgtattctgctgagaaaccctggcaaccaagcagcgtatgaacattttgagaccatgaag
aatcagtggattgacaacgtggaaaaaatgaccggtttggtggatgaggccatcgatacc
aaatctctgctggacgcctctgaggacgccataaagaaggacttggataaatgccgcgtg
gccatgaccaatcaccagccccagatgctggtggccggtgctacgagcattgcccgaaga
gccaaccgcatccttctggtggcgaaacgagaggtggagaactctgaggacccaaaattc
agggaaatggttaaagctgcgtcggatgaactgagccagactatttctcccatggtgatg
aatgcaaaagctgtggccggaaacatccaagaccccaaccttcagaagagctttttggac
tcgggttttaagattcttggagctgtggcaaaggtcagggaagccttccagccccaagag
ccagacttcccaccacctcctcctgagttggatcagctcaatctcaatgatgaagcggca
cctccaaagcctcctcttccagagggagaggttcctccacccaggcctcctcctcctgag
gagaaagacgaggagttcccagagcacaaagctggagaaaaagtcaatgagcccataatg
gtggctgccaggcagcttcacgacgaagcccgcaaatggtctagcaaaggaaacgacata
attggtgctgccaaacgaatggccctgctcatggcagaaatgtctcgtttggtgcgtgga
ggcagcggaaacaagcgtgctctgatccagtgcgccaaggacatcgccaaagcctccgac
gaagtcacacgactagctaaggaagtggccaagcagtgtaccgacaaacggatccggacc
aacctcctccaagtgtgtgagcgcattcccaccatcagcactcagctcaaaatcctttcc
actgtcaaggccaccatgttgggccgcaccaacatcagtgaagaagagtcggagcaggcg
actgaaatgttggttcacaacgcccagaacctgatgcaatcagtaaaggagaccgtcaga
gaggcagaggcagcttccattaagatccggacagatgcaggttgcaccctccactgggtc
agaaagaccccctggtaccagtaa
DBGET
integrated database retrieval system
