Cyprinodon variegatus (sheepshead minnow): 107089642
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Entry
107089642 CDS
T06110
Symbol
plat
Name
(RefSeq) tissue-type plasminogen activator isoform X1
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
107089642 (plat)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107089642 (plat)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cvg00536
]
107089642 (plat)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
107089642 (plat)
Peptidases and inhibitors [BR:
cvg01002
]
Serine peptidases
Family S1: chymotrypsin family
107089642 (plat)
Glycosaminoglycan binding proteins [BR:
cvg00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
107089642 (plat)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin
Kringle
DUF1986
EGF
hEGF
fn1
Trypsin_2
JAG1-like_EGF2
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
107089642
NCBI-ProteinID:
XP_015238030
Ensembl:
ENSCVAG00000018691
UniProt:
A0A3Q2DAP8
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MRSLIQGIFILSALCCSLADNVEVLRTKRGTRFYRGEPARQPARRTLLIVQLKKPSPSYE
TSLLCVDSETSAVHSFGDSWLRWKGQRVEYCHCPLGGRERCHVVPVINCYVSQCYNGGTC
KEAVYSSDYICQCPPGFSGTQCEINTNEKCIVGQGEGYRGTRSISQTGAECINWNSTTLR
GRRFTARKSDARSLGLGNHNFCRNPDQDSLPWCFIYKGTQIGWEYCSLPKCPQDNNTECA
VGLGQNYRGTASVTNSGSTCLPWDSPVVRRKLNNAWRSNALELGLSNHNFCRNPDGDEAP
WCHTYKNMLLTWEHCDIPKCSKRPSVITTPGIRAPTTNNNNGATCGKRLDNTLNRRAFRM
FGGRYSDITEQPWQALINVYQARLRKHFHRCGGVLIDSCWVLSAAHCFEISDKADKLEVV
LGRTFRKQNSSSEQIFKVEKYWIHEKFNYETFDNDIAILKLQTDIGICAVDSPEVHPACL
PESGLVLPDWTECEISGYGKNSEFSDEYSEQVKRGHVRLWPKERCVPEVLSGRTVTSNML
CAGDTRGLDDACKGDSGGPLVCRNKDRMTLMGVISWGDGCGQKDKPGVYTRVSHYIDWIN
DIIKANPV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtttaattcaaggaatcttcatcctttctgctctctgctgctccctagcggac
aacgtggaggtacttcgcaccaagcgagggacccgtttttacagaggtgagcctgccagg
cagccagctagacggacactgttgatagttcagctcaagaagccttcaccttcctatgaa
acatccttactgtgtgtggatagtgaaacatcagcagtgcatagttttggtgactcttgg
ctccgctggaaaggacagcgtgtggagtattgccactgcccattaggaggaagagagcgt
tgtcatgttgtgcctgtcatcaactgctacgtgtcccagtgctacaacgggggaacctgt
aaggaggccgtctactcatcggactacatttgtcagtgtccccctggcttcagtggaact
cagtgtgagattaacaccaatgaaaaatgcatcgtggggcagggtgaaggctaccgtggg
accaggagcatcagtcagaccggagcagagtgcatcaactggaattcaacaactctcaga
ggaagaaggttcacagctcggaaatcagacgccaggagccttgggctggggaatcacaac
ttctgcaggaaccccgaccaggacagcttgccgtggtgttttatatataaaggcacacag
ataggatgggaatactgctccttgcccaaatgtcctcaagataacaacacagagtgtgcg
gtgggattaggtcagaattacagaggcacagcttctgtcaccaatagcggctccacttgt
ttaccgtgggactcccctgttgtcagacgtaagctgaacaatgcttggagatccaatgcc
ttagaattggggcttagcaaccacaatttctgcaggaatccagatggcgacgaggctcct
tggtgtcacacctacaaaaacatgctgctgacctgggagcattgtgacatacctaaatgt
tcaaaacgtccgtccgttattaccactcctggcatacgtgctccaactactaataacaac
aatggagcgacatgtggcaagcgcttggataacaccttaaatcgtcgggctttccgcatg
ttcggaggcagatatagcgacatcacagagcagccatggcaggctctcatcaatgtttac
caggcccgcctcaggaaacacttccaccgctgcggaggagtccttatcgactcctgctgg
gttctgtctgctgcacactgcttcgaaatcagtgacaaagcagacaagttggaagtcgtt
ttgggaagaacgttccggaagcagaattccagcagtgagcagatttttaaggtggagaag
tactggatccatgagaaatttaactacgaaacatttgacaatgacattgctattttaaag
cttcagacggacattggcatatgcgctgtggactctccagaggttcatccagcttgtctg
ccggaaagtgggctggtgctgcccgattggaccgagtgcgagatctcaggctatggaaaa
aactctgaattttctgatgaatactcggagcaagttaaaagaggacatgtgcgcctttgg
cccaaagagcgctgcgttccagaggtgctgtctggacggaccgttacctccaatatgctg
tgtgcaggtgacaccagagggcttgatgatgcctgcaagggagactccggcggccctctc
gtgtgccgaaacaaggacaggatgactctgatgggcgtgattagctggggagatgggtgc
gggcagaaggataagccaggggtctacacacgcgtctcccattacatcgactggatcaat
gacataattaaagcaaaccctgtgtaa
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integrated database retrieval system
