Cyprinodon variegatus (sheepshead minnow): 107089688
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Entry
107089688 CDS
T06110
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107089688
Membrane trafficking [BR:
cvg04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107089688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank
C1_2
Ank_2
Bac_globin
PHD
PHD_2
Prok-RING_1
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
107089688
NCBI-ProteinID:
XP_015238086
Ensembl:
ENSCVAG00000019520
LinkDB
All DBs
Position
Unknown
AA seq
1850 aa
AA seq
DB search
MLVMELSRRKVPLYGEAKVFALLEGLDSVPEDAEVYVVLEGSTLVHVTRAQNDVMLYFIV
PGHNLPEEVSVRAFLCSETLHLTWVGGASIEYVNDDAQDLAEHIIIHGHHLSAVDHKELS
SLFSLQHESSRWAMDRKVALAMANLDIPPKWNVLGSHHGDEFRPRECPLHLAVRWGLYRL
AELLLCQPGGLMAVSLPNEEGVTPLQLAQNTGNTELLELLTNPPNPLATPPAGLTQIWVD
PSRLLRFCHDTGNLTLTVRQNLRWSSVESQYADILLLRNRLKDENFLREIKALRRERVET
ITEKEELVDDPADSALYADINGENSADENALNFFAEDLEEPLIFGLNEEEEEDDPSCTDF
EKSQSIRESQASSPTRAAAARLSAMIHGKDQVYANAMLVDKVEGADIKYRSPGDEEQVSP
SSCWDSLSPTLVESVNCSQNRSQSSSHRGLRGSQGPGQDNGREAYSCASPPYPFASSSPS
FPSSPLASAIRLFEGAQRRHPQMGPSDSPASEHREFSLTDAGRGLSPGLECDSEEDDILG
HSYSCSSSKQRSILQSSSGEERDSFDTSPDFNRSHSETAKKSNTNSEEAEVRLRSYSYSS
PKARPSRPLLNRDSAVTDLEEDGTFSSGGRSLLQALSLSKSLSRLNQVKQRAFNLTETAK
EKRALGFRKRAQSAEEEGTTSLQHLTLTEFLKEIEDEEWDKYIIPSKVESEKYKVSRTFS
FLKSRMSSTRSKTKVKGKETKEGKEKSGASNGHQFISVSPPAPSLCVACDKPVSGKDLLQ
CSNCSLNVHKTCRESVAVCGKKLPERNPVLMKSKTMSLPHSFAKEVSPSSLFSSSACSSP
SSSGPTMAKEKRETVASFSKSQSISIDIRCWNETRVDSECNTTACTNSSPSEDGTPVTAT
PPFADLPISTKDTVDAPLLSDLSADLLGLEAESWSLAVCPEFCREQDRRTIKRQDVIYEL
MQTELHHIQTLTVMSEVFRRGMLEELQLDSDCVARIFPCLDPLLLLHRNLFRALQECRQA
ATQKENSRNYLIHQIGDVLLQQFSDENAEKMKQVYAEFCSHHAEAVNLFKELQQQNKKFQ
NFVRQQSNNSLVRRREVPEFILLVTQRITKYPVLVEKILQYTQEGSREHSDLSDALAQIR
EIITAVDLMVGKYERFQELQEVLARLETKSIAKLKNNKIFRKQDLHSKHRALQHKGLLYW
KTATGRLKDTLALLLTDVLVFLQEKDQRFVFASVDQKPPVIPLQKLIVREVANEERGMFL
ISASSVGPEMYEVHTITKEERNAWMRHIRQAVESCPEEEEEEERATEAEEARQAAEVRVQ
KISKFQETLLTQDQQICQGLEEKLQLYAELTELTLCAPESIPHPHLLVGPAQYVDIEAPR
QASSLLTAALKEAENLINILQTRDVGPVHSQNSPVQAPECCSYNSHGSSIQESPSEPDYL
STLSISSNSLGSDCELAAMDNTSWSSAVELKKGETKGTLLKVTESVQSLTQLLYSLQAAV
TLQDSFYEVQKLLLQEGEKPQLRSITSLQTNLEQEKQRNTDKVKEEKKGLERKKEDADEV
QKLQAKLKQELQRWEKECLAREKQQTEHENMLEQREQQCLFEATRLRCEREELEAQLQEY
QQNLDRLREGQRSVERDKERIEAQQRLLQSWRHSRQSSLPVTIPLDGYKVPTHSRTGSFD
GNFSLFKNKSGLLSCVQQNHLQQPTNYSYQHALSLQKKNNPDGLPLSSSCAADRSLSASL
CNSLNTLLSQTHSKQPLYGTNHSCTLPSTDCLHPFSSRMASQQQRSSNTDATQLEKTQTS
GSWRSGITGHAIKEHNSASPSLTPLLPPQAYLSLEGQNGEEGVEENIVYL
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatggagcttagcaggaggaaggtgcccctctatggtgaggcaaaagtattt
gcattgctggagggtttggattcagtgccagaagacgccgaggtctatgttgttctagaa
ggatccacgctggtccatgtaacccgggctcaaaatgatgtcatgctctactttattgtg
ccaggacacaatctgcctgaggaggtctctgtgcgggcctttctgtgctctgaaaccctg
cacctcacctgggtaggtggggcttctatagagtatgtaaatgatgatgcacaggatttg
gcagagcatatcattatccacggacatcatctgagcgctgtggatcacaaggaactgagc
agcctcttcagtttgcagcacgagagctctcggtgggctatggatcgaaaagtggccctt
gctatggccaatctggacattcctccaaagtggaatgtactggggagtcaccatggagat
gaattccgtcccagagagtgtccccttcacttggctgtgcgatggggtctgtatcgactg
gcagagctgttgctttgtcaaccagggggtttaatggctgtcagtctccctaacgaagag
ggggtcacgccactgcaactggcacagaacacaggcaacactgagctgctggagcttctc
acaaacccacccaaccccctagcaactcctcctgcaggtctgactcagatttgggtagat
ccatcccgtctgctgaggttttgccatgacacagggaacctgactttgacagttcgacaa
aaccttcggtggagttcagtagagagccagtatgctgatatcctcctgctcagaaacagg
ctgaaagatgagaacttccttagggagatcaaagcccttagaagggagcgggtggaaacc
ataacagagaaggaagaacttgtggatgatcctgcagactcagctctgtatgctgacatc
aatggagaaaactctgctgatgaaaatgctctcaacttctttgctgaggaccttgaggag
ccgttgatttttggcctgaatgaggaggaagaggaggacgatccttcctgcactgacttt
gagaaaagccagtccataagggagagccaggcctcgtccccaactcgggcagcagctgcc
agactctcagcaatgatacatggcaaagaccaagtctacgccaacgccatgttggtggac
aaggttgaaggagctgacattaagtatcggtctccaggggatgaggagcaggtcagccct
tcatcctgctgggactccctctctcccactctcgttgaatcggtaaactgctcccagaac
cgttcccagtcatcatcccatcgcgggctgaggggaagtcagggcccaggccaggacaat
ggcagggaggcatactcttgtgcttctcccccttatccctttgcctcctcctccccttcc
tttccttcctcacccttagcttccgcaattcgtttgtttgagggagcacagagacgtcat
ccacagatgggtccttcagactccccagcttcagaacacagagagttcagcttgacagat
gcaggccgaggcctgagccctggtctggagtgtgacagtgaagaagatgacatacttgga
cattcctactcttgttcatcttcaaaacagcggtccatcctgcagtccagctctggagag
gaaagggactcttttgacacttcacctgactttaaccgctcacactcggaaaccgcaaag
aaatccaacacgaattcagaggaggctgaggttcgcctgcgctcatactcatactcttcc
cctaaagcgaggccatcacggccgctgctaaaccgagactcagctgtcaccgatttggaa
gaagatggcactttcagcagtggaggtcgctcactacttcaagctttatctctctctaaa
tcactctcacgtctcaaccaagttaaacagagagccttcaacctgactgaaacagcgaaa
gaaaagagggctctgggtttccgtaagcgggcccagtcagcagaggaagagggcacgacg
tcactccaacatctcacccttacagagtttctcaaagagatcgaggatgaggagtgggat
aaatacataattccttctaaggtcgagtcggagaagtacaaagtgagccggactttcagt
ttcctaaagagcaggatgtccagcactcgaagcaaaaccaaggtaaaaggcaaagagacg
aaggaggggaaagagaagtcaggagcatctaatgggcaccagttcatttccgtgtctcct
cctgctccttctctctgtgtggcctgtgataagcctgtttctgggaaagatttgttgcag
tgttccaactgctctctgaatgtccataaaacctgtcgagaatcagttgcagtttgtgga
aagaagttgccggagaggaatccagtgctgatgaaaagcaagaccatgtctctcccacac
agctttgccaaggaagtctctccgagctctcttttctcttcatctgcttgctcttcacca
tcatcttcaggtccaacgatggcaaaagagaaaagggaaactgtggcttctttctccaag
agccaatcaatctccattgacatcagatgctggaatgaaaccagggtggacagtgaatgc
aacacgacagcgtgcactaacagttcaccgtctgaagatggaacacctgtcacagcaact
ccccctttcgccgacctcccaattagcacaaaggatactgttgacgctccacttctgagt
gatctgtcagctgacctgctggggctcgaagctgagtcttggagtctcgccgtctgtcca
gagttttgtagagaacaagacaggcgcaccatcaaacgacaagatgttatctatgagctg
atgcagacggagctgcaccacattcagacactgacagtcatgtcggaggtttttaggaga
ggcatgctggaggagctgcagctcgactcagattgcgtggcccggatcttcccgtgcttg
gatccccttcttcttctacacaggaacctcttcagagcgctgcaggaatgccggcaagct
gcaacccaaaaggaaaattcacgaaattacctcatccatcagattggcgatgtgctgctg
cagcagttctcggatgaaaatgctgagaagatgaagcaggtgtacgcagagttctgcagt
caccatgcggaagccgtgaatctcttcaaagagctccagcagcagaacaaaaaatttcaa
aactttgtcagacaacagagtaataactctctggtcagacgaagagaagtgccagaattt
atcctgcttgtcacgcagcgcatcactaagtatccagttctggtggagaagatactacag
tacactcaggaaggaagccgggaacactctgacttgtcagatgctctggctcagatccgt
gagatcatcacagcagtggacctgatggttggtaaatatgagagatttcaggagctgcag
gaagtgctggccaggctcgaaaccaagagcatcgccaagcttaagaacaacaagatattt
cgcaaacaagacctacacagcaaacacagggctttgcagcacaaaggccttctctactgg
aagactgcaaccgggcgtctaaaagacactttagcacttttgctgacggatgttctggtt
tttttgcaagaaaaagaccaacgcttcgtatttgcctctgtggaccaaaagcctccagtt
attcccctgcaaaagctcattgtgagagaggtagccaatgaggaacgaggaatgttcctt
atctctgcatcttctgttgggccagagatgtatgaagttcacaccatcacaaaagaggag
agaaatgcctggatgagacacatccgacaagctgtggagagttgtccagaggaagaagag
gaggaggagagagctacagaggcagaagaagccagacaagctgcagaagtgagagttcag
aagatcagcaaattccaggaaacactgcttactcaggaccagcagatctgccaaggcttg
gaggagaagttacagctttacgctgaactcacagaattaactctctgcgctccagagtct
ataccacatccccatctgctggtcgggcctgcacaatatgtcgatattgaggcaccacgt
caggcatcgtcgctgctcacagctgcactaaaagaagcggagaacctgatcaacattctt
cagacccgtgatgtaggtccagtccacagtcagaactctccggtccaagcgcctgagtgc
tgcagctacaacagccacggcagcagcatccaggagtctccttctgaaccagattatcta
agcacactcagtataagctccaattctctgggatcggactgcgagctagcggccatggac
aacacatcatggagctcagcagtcgagctcaaaaaaggggaaacaaaagggacattatta
aaggtgacagaaagcgtccagagcctgactcagcttctctacagtctacaggcagcagta
acccttcaggacagcttctatgaagtccaaaaacttcttcttcaagaaggagaaaaacct
cagcttcgcagcatcacatccctccaaaccaacctggaacaggagaagcagaggaacaca
gacaaggtgaaagaggagaagaagggtttggaaaggaagaaggaggatgcggatgaggtg
cagaagcttcaagctaagctcaaacaagagctgcagcgctgggaaaaggaatgtttggct
agagagaaacagcagaccgagcatgaaaacatgctagagcagcgagagcagcagtgtctc
tttgaggccacacggctgcgctgcgagcgagaggagcttgaagctcagctgcaggagtat
cagcaaaacctggacaggctgagggagggccagaggagtgtggagagggataaggagagg
atcgaagcccagcagagactgctccagagctggaggcacagccgccagagcagcctgcct
gtcacaataccactggatggatacaaggtccccacacacagccgcacaggcagctttgat
gggaacttctcactatttaagaacaagtcaggtttgctcagctgtgtgcaacagaaccac
ctccagcagccgaccaactacagctaccaacatgccctctcattgcaaaagaagaataat
cctgacggcctaccgctcagctcaagctgcgctgcagaccgaagccttagtgccagcctc
tgcaacagcctcaacactctgcttagccaaacgcacagcaaacaacctctttatggtacc
aaccacagctgcaccctaccgtccacagactgcctccatccattcagtagcagaatggct
tcacaacagcagagatccagcaacacagatgctacccagcttgagaaaacacaaacttca
ggttcctggaggtcagggatcacaggtcatgcaatcaaggagcacaactccgcatctccc
tctcttactcccctcctcccaccacaggcttatctttccctcgaaggacagaacggagag
gagggagttgaggaaaatatagtttacctctaa
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integrated database retrieval system
