KEGG   Cyprinodon variegatus (sheepshead minnow): 107089705
Entry
107089705         CDS       T06110                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013  Nucleocytoplasmic transport
cvg03015  mRNA surveillance pathway
cvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107089705 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    107089705 (rbm8a)
   03015 mRNA surveillance pathway
    107089705 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107089705 (rbm8a)
   03041 Spliceosome [BR:cvg03041]
    107089705 (rbm8a)
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107089705 (rbm8a)
Spliceosome [BR:cvg03041]
 Complex C
  Other components
   EJC/TREX
    107089705 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 107089705
NCBI-ProteinID: XP_015238529
Ensembl: ENSCVAG00000020734
LinkDB
Position
Unknown
AA seq 175 aa
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGLEEGSRSRAKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQELMGQTISVDWAFVRGPPKNKRRGGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggacgtgttggatcttcatgaggcgggaggcgaagactttcctatggatgaggat
ggtgatgaaagcatccataagctgaaagagaaggccaagaagagaaaaggacgaggcttc
ggcttagaggaggggtccaggtccagagctaaagaggactacgatacggtggagcaagac
ggcgatgaaccgggtcctcagagatctgtggaaggttggatcctgtttgtgacgggtgtc
catgaggaggcaacagaagaagacatccatgacaagttttcagagtttggtgaaatcaag
aacctgcatcttaaccttgatagaagaacaggttatctgaagggctatgctctagtagag
tatgagacgtacaaagaagcgcaggcagccatggaggggctgaacggtcaggagctgatg
ggccagactatcagcgtagactgggcgtttgtcagaggacccccgaagaacaagaggagg
ggaggcggacggagacgcagcagaagtccagaccgcagacggcgctga

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