Cyprinodon variegatus (sheepshead minnow): 107089734
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Entry
107089734 CDS
T06110
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00061
Fatty acid biosynthesis
cvg00071
Fatty acid degradation
cvg01100
Metabolic pathways
cvg01212
Fatty acid metabolism
cvg03320
PPAR signaling pathway
cvg04146
Peroxisome
cvg04216
Ferroptosis
cvg04920
Adipocytokine signaling pathway
Module
cvg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107089734
00071 Fatty acid degradation
107089734
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107089734
09143 Cell growth and death
04216 Ferroptosis
107089734
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107089734
03320 PPAR signaling pathway
107089734
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cvg01004
]
107089734
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107089734
Enzymes [BR:
cvg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107089734
Lipid biosynthesis proteins [BR:
cvg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107089734
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of breast milk
107089734
Exosomal proteins of breast cancer cells
107089734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Chorion_1
Motif
Other DBs
NCBI-GeneID:
107089734
NCBI-ProteinID:
XP_015238165
Ensembl:
ENSCVAG00000021278
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MGAQSDSTLQSVLLFPLHLLIWLYSLISFLPWYFITSAGQKCSQSKRMKARSTSGSPEGP
YRSVDHFESLATEDFPGKDTLDKLFQHAVQRFGPADCLGTREVLSEENEIQPSGKVFKKV
ILGEYRWLSYQQLDAAASEFGSGLAALGQQPKSTIAIFCETRAEWMITAQACFRRNFPLV
TFYATLGEDAIAYGLNETAVTHLVTSVELLETKLKKVLPQISNLKHIVYVDQRKVSSEGF
PAGVSIHSMQAVRELGAAPENLGREIVTPQPSDLAVVMYTSGSTGRPKGVMIVHSNLIAG
MTGQCERIPGLGVLSTVADFSTGRVGAPLICCEIQLRDWTEGGYTSKDQPNPRGEILIGG
PNVTMGYFRQDGNNQDFFVDEKGQRWFCTGDIGEVYPDGCLQIVDRKKDLVKLQAGEYVS
LGKVESALKNCSLIDNICAYANSDQNYVVSFVVPNQKRLTELAKQRGVEGKWEELCNHPE
MEKEVLKEIKEVAAKIKLQRFEVPVKVRLSPEPWTPETGLVTDAFKLKRKELKNHYLTDI
ERMYGRK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcccagtcagactccaccctccagtccgtcctcctctttccgctccacctcctc
atctggttgtactcgctcatttcattcctgccctggtacttcatcaccagcgctggccag
aagtgttcccagtccaagaggatgaaggctcgttctaccagcggctccccggagggcccc
taccgctccgtggaccactttgagtccttggccacagaagacttcccagggaaggacacc
ctggataaactcttccagcatgcggtgcagcgcttcggccccgccgactgcctcggcacc
agagaggtgctgagcgaggagaacgagattcagcccagcgggaaagtgtttaaaaaggtg
atactgggggagtaccggtggctgtcctaccagcagctggacgctgcggccagcgagttc
ggcagcggactggcggctctggggcagcagcccaaaagcaccatcgccattttctgtgaa
acccgagcggagtggatgatcacggcgcaggcatgcttcaggcgcaacttccccctggtg
accttctacgccacgctgggagaggacgccatcgcctacggactgaacgaaaccgccgtc
actcatctggtcaccagcgtggagctcctggaaaccaaactgaaaaaagttctgccgcag
atctccaacctgaagcacatcgtctatgtggaccagaggaaagtcagctcagagggcttc
ccagcaggagtttccatccacagcatgcaggccgtacgggagctgggcgccgcgccagag
aacctgggaagggaaatcgtgacgcctcagccctccgatctggcggtggtgatgtacacc
agcggttccacgggtcgccccaaaggagtcatgatagttcacagcaacctgatcgcaggg
atgaccggccagtgcgaacgcatccctggactcggcgttctgtctacagttgcagatttc
agcaccggtcgcgtcggagctcctctgatctgctgtgagattcagctcagagattggacc
gaaggtggctacaccagcaaagaccagcccaacccaagaggggagatcctgatcggtggt
cccaacgtgaccatgggctacttcaggcaagacggcaacaatcaggacttttttgtggat
gaaaaaggtcagaggtggttctgcaccggagacatcggagaggtttaccccgatggctgc
ctgcagatcgtagatcgcaaaaaagatttggtgaagctgcaggctggggagtacgtgtct
ctgggcaaagtggaatctgctctgaagaactgttctctgatcgacaacatctgcgcttac
gctaacagcgaccaaaactacgtggtcagcttcgtggttcccaaccagaaaaggctgacg
gagctcgccaagcagagaggcgtggaggggaaatgggaggagctctgcaaccaccctgaa
atggaaaaagaagttctgaaggagatcaaggaggtcgcagctaaaattaaactccagcga
tttgaggttccagtgaaggtgcgtctgagccccgagccgtggaccccagagaccggcctc
gtcacggacgcgttcaagttgaagaggaaagagctgaaaaaccactacctgaccgatata
gaaaggatgtacgggaggaaatag
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