KEGG   Cyprinodon variegatus (sheepshead minnow): 107089735
Entry
107089735         CDS       T06110                                 
Symbol
ell
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107089735 (ell)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cvg01009]
    107089735 (ell)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvg03021]
    107089735 (ell)
Protein phosphatases and associated proteins [BR:cvg01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107089735 (ell)
Transcription machinery [BR:cvg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     107089735 (ell)
    Little elongation complex (LEC)
     107089735 (ell)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing Seryl_tRNA_N Herpes_DNAp_acc Ig_C19orf38
Other DBs
NCBI-GeneID: 107089735
NCBI-ProteinID: XP_015238161
Ensembl: ENSCVAG00000017084
UniProt: A0A3Q2D6Z3
LinkDB
Position
Unknown
AA seq 630 aa
MAALKEERSYGLSCGRVSNGSNVTVFHVKLTDSALRALEGFQSSKVLSLQPLIRFNGNQG
KISIPRSETSSEQQTFTFDLSNVGRDNPQGSFDCIQQYITSEGSIQLDCLGSIQDKITVR
ATDDSYQKARENMAQVEEETRSRSAIVIKPGGRYVGKKVQIRKPAPGLSDVAPSRRTSRP
VLISSSTQKKCTTQHRPLRERLIHLLALKPYKKPELILRLQKDGLSQLDKESLDSHLQQV
ANLNGKENTFTLKDFMYKEVQKDWPGYTEGDQQLLKRILFRKQAQSSSAPVPESPPKELG
STSPSQKRPAADFIDPLVNKKPRISHLANKAATVQVNGKLSSSCSKGDSVGAPLSTSEGG
VTSGSQPLPMLDIPRPFEALSDVSNDSSNNGRDCDSQEAALSERLSQPPSLPSMPTVAFA
PSIGTSSSGHTVLEGPRDSSPMAINNKTKKKSKKHKDKEKSKGKGREKEKKVCPEPLSEP
KAACEMSLKNSKNNSIALKSTDLNGMCKATSIPSSSPEVADYLLKYTVINSPEQRQKYKN
DFNAEYSEYRGLHARIEGITRQFTVLDNELKQLQHGTDKYKSIHNQILQEYHKIKKTNPN
YSQEKNRCEYLHHKLAHIKKLIAEYDHQQL
NT seq 1893 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaggagcggagctacggactgtcctgtggaagagtgagcaacggc
agtaatgtcaccgtctttcacgttaaactcactgacagcgctttgagggcgttggaaggc
tttcagagcagcaaggtcctgtcattacagccattgatacgatttaatggaaaccaaggg
aaaatttcaataccacgctcagaaacttccagtgagcagcaaacgtttactttcgaccta
tcgaatgtgggcagagataacccccagggcagcttcgactgcatccagcagtacatcacc
agtgaagggagcattcagctggattgtctgggcagcatccaggacaagatcacagtgaga
gcgaccgacgactcctaccagaaggctagagaaaacatggcccaggttgaggaggagact
cgcagtaggagcgctatcgtcattaagccagggggaagatatgtaggtaagaaagtccag
atccggaaaccagcgcctggtctttcagatgtggctccctcacggaggacatctcggcct
gtcctcatctctagcagtacgcaaaaaaaatgcacaactcagcaccggcctctccgtgag
cgcctcatacacctgctggccctgaaaccttacaaaaagcctgagttgattttaaggttg
cagaaggacggcctttcacagctggacaaagaatccctggacagccacctgcaacaggtc
gccaatctaaatgggaaagaaaataccttcacattgaaggatttcatgtataaggaagtc
cagaaagattggccggggtacaccgagggagaccagcagcttctcaagagaattttgttc
agaaaacaggcccaaagcagttctgcccctgtaccagagagtcctcccaaagagctggga
tccacttctccatctcagaaacgacctgctgctgacttcattgaccctcttgtcaacaaa
aagcccagaatatcacaccttgccaacaaggctgcaacagtccaagtgaacggcaagctc
agctcttcctgcagcaaaggagattctgtgggagcgccgttgtctacatccgaaggcggc
gtaacatccggctcacagccactcccgatgctggacatccctcgtcctttcgaggcttta
tcagacgtcagcaatgactccagcaacaacgggcgggactgcgactctcaggaagcggcg
ctgtccgagcggctcagtcagccgccgtcgcttccgtctatgccgacggtggccttcgct
ccgagcatcggcacatcctcctccgggcacacggtgctggaaggcccacgggacagtagc
cctatggcaattaataacaaaaccaaaaagaagtcaaaaaagcataaagacaaggagaaa
agcaaggggaaagggagggagaaggagaaaaaggtctgtccggagcctttgtctgagcct
aaagcagcctgtgaaatgagcctgaagaactccaagaacaacagtattgcattaaaaagc
acagatctgaatgggatgtgcaaagctaccagtattccttcatcatcacctgaagttgca
gattatttattgaaatacacggtgatcaactccccggagcagcgacagaagtataaaaat
gatttcaacgctgagtatagtgagtaccggggtctgcatgctcgaatagagggcatcacc
cggcagttcactgtgctcgacaacgagctgaaacagcttcaacatggcacagacaagtac
aagtcgatccacaatcaaatacttcaagagtatcataaaatcaaaaagactaatccaaac
tatagccaagagaagaaccgctgtgaatatctacaccacaagctggctcatataaagaaa
cttatcgcggagtacgatcatcagcaactttaa

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