Cyprinodon variegatus (sheepshead minnow): 107089743
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Entry
107089743 CDS
T06110
Symbol
irx3
Name
(RefSeq) iroquois-class homeodomain protein IRX-3
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107089743 (irx3)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
107089743 (irx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
107089743
NCBI-ProteinID:
XP_015238179
Ensembl:
ENSCVAG00000016019
UniProt:
A0A3Q2D552
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERQGIAGSTRAGAELSPSGALSNVLSSMYGSPFAAAAQGYGAF
LPYSNDISIFNQLGAQYDLKDGHGVQHPGFAPPHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRTD
EEGNVYTSDHEGEEGDKREDEEEIDLENIDTENIESKEDLDEQDDLHSDIKLDGRSDSEI
SDGYEDLQGAEQRFLKAVGKEAKDAQRGGELFGHHNHHHHSSLEIKASQANTEQLKLNPV
SVSSPPSENNPAPAQKPKIWSLAETATAPDNPRRSPQVNGSGPTAAGGGAATQTILGPHR
LISSCPVGKIQNWTNRAFSAHQLALLNSNHYLGLANQATATSLALYSSRQAEDKSHSSET
AVTGTCPRH
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctgggatatcagtacatccgaccgatatacccgccggagcgacag
gggatcgcgggcagcaccagggccggggcggagctgagtccgtcaggcgcactttccaat
gttctatccagcatgtacggctctcctttcgccgctgccgcacagggctacggagccttc
ctaccttactccaacgatatatccattttcaatcagttgggtgctcagtatgatctaaaa
gatggccacggtgtccagcacccagggttcgccccccctcacccggctttttatccatat
ggtcagtatcagttcggtgacccgtccaggcccaaaaacgccaccagggagagcaccagc
accctgaaggcctggctcagcgagcaccgcaagaacccctatccgaccaagggcgagaag
atcatgctggccattatcaccaagatgaccctcacacaggtgtccacttggtttgccaac
gccaggaggaggctaaagaaggagaacaagatgacctggacccctcggaaccgcaccgac
gaagaggggaatgtttacaccagcgatcatgagggggaggagggggacaagagggaggac
gaggaggagattgacttggaaaacatcgacacggaaaatattgagagcaaggaggacttg
gacgaacaggacgaccttcactcagacattaaactagacggaaggagtgactcggagatt
tcggatggttatgaggatttacaaggtgcggagcagaggtttctgaaggctgtagggaag
gaggccaaggacgcgcagagaggaggggagctcttcggccaccacaatcaccaccaccac
tcctctttggaaatcaaggcgtcccaagcgaacacagaacagctgaaactcaacccggta
tccgtcagctctccgccctcagagaacaacccagccccggcccagaaaccaaagatctgg
tcgctggcagagactgccacggctcccgacaatccccgcaggtcgccgcaggtaaatggc
agcgggccgacagcggcaggaggaggcgcagccacccagaccatcctcggtccacacaga
ctcatctcttcctgtcccgttgggaaaatccagaactggacgaaccgagcgttctcggcg
caccagctggctttactgaactccaatcattatctgggacttgcgaaccaggccaccgcc
accagcctggccctgtacagcagcaggcaagcggaggacaagagtcatagttcagagact
gcagtcacaggtacatgtccccggcactga
DBGET
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