Cyprinodon variegatus (sheepshead minnow): 107089815
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Entry
107089815 CDS
T06110
Symbol
cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107089815 (cfap54)
Cilium and associated proteins [BR:
cvg03037
]
Motile cilia and associated proteins
Sperm associated proteins
107089815 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP54_N
Motif
Other DBs
NCBI-GeneID:
107089815
NCBI-ProteinID:
XP_015238280
LinkDB
All DBs
Position
Unknown
AA seq
2445 aa
AA seq
DB search
MKQMDSSRDHSVCVKGLKMLLDIQKKYKHRLPDEFYQEQMLQVADILCGLKLYQLALWQG
YSLYLLQFSSVQITDITDVDHFNACYFPEGFGLEQRTFTMKTHAMIGCTKCIFEEEKKCS
TLSQKGLCKLLKLLNFIRIMMQAFQQHEHLFWQIYNGSLFIYNICRYLMTMNYSEQALEY
LLWASISLELSVPLMTARYLPLITALYCSVCQCYYDNQAKEQAEEFANRALGKINELAKL
ETPTDATNKEAQKAYREASVKLGALVFKRAVFNSRGEPKTIRSLKDIPNAPWPRTLTETM
LISQFDCTAGQFLAILEALWDSSTRPLHITVPDNAETQTVVLELLSAGMSILSGVKSTGK
QSDDKQYLSPNILTSASTLIDLAIKGENQVSVMSAVRFIKLLFNYNQPEEFSELTKAMLH
HLSGLEGQPFRKAEVDLNLLHCFKNLLFSQGDSPKEDKKDDTRGPFSYMSNEFLDLVDTL
RLSTCGSDSELWPDPDLSFDAFVFLWSKLRMIMQIHHLEAPESQHDRQKIDSYGKCLWCL
SVLSEVALTCELANVDCIMTAEMHLMLGKQLEKAADRINQTEESAVGGYVKVKPRPFSLL
ERSNTDLLKKVCEVTKKAQEALSKGVSALIPLDHSAITDTACMQKYMSPHPSTVSSTTTS
EEKNRTDESSFKAEEEKETKTESENKGHQDTESKHLFILVKDLYLQLDIIYVKASVKLLQ
LNEVTESDLLDRIKRNKVSKAHLMIQKASVEHSRGGPNESSKIKSLLEEATILIEKAELE
ERKIYMANVKNPGRKKDKAGPGENSPAPPILLSRTDNSFTFAPAPYDLERQVSWYQLCGR
AVQGINQKVRLGDCSIPGTGILVPVVSGECFLMVKGLQSNQKYVFAVAAYDSQGKLLGDA
IGDTTLPIIACMPVPLLCTWAYLAQVAFQTEQYAVSKKACRKLWSHYTDPDCLSKSELNR
FSSTRLRKETLQNSSPHLCQMFLASIFTETEINVQQASLHWASFSNSGPFIWEQEAKIAE
CERMLLAIDLAMYLNDGRTALRAVVTCYMILAPLIYYQISCDPVVQVLRKCLVFLKENSS
LLKQRGTGYTSESIMHMVGCITYYLSKVQCNDGHNLLQELFKAHSKPSTLPWQANKAGAQ
AANDGLRKIRHQIKALHVKNKKSIVSKTKLNKDTDILSTTVEDPTLLYELLSRCTLQDSY
NKVMKLTGKTYFLEFAVLLLQRTLEEGRADLVLICGQNIHEVLSRKHKEMLGQTKNRVRG
ISNSKGGSNSPATKIRDLPQNVPTYEHTQRKLKTKIPHSLLKNLRTNREILIVENSLAMM
SNKVYRHRRLLKLRNLTAKERAWRSFSNYCMAMAHLAQFYQGLELMHGTQLEQRYSQLGA
RCLSFAYSGIIMRKDSLPSSENKLELKKNSCLREDILKAGKQTTHKEAVRDDVSITKEII
GEREGSFKSQDKSIETSTSNFGSLLDSVKNAALYLRRAMVLAHRGSHWTTLQYVCQTLWD
QNNTFTSMVQQVALQEKQPPVLADQLHAIFTPILVLAIDLMLDMLDKLQIWRLYDLDSTV
EELESCLHFSAPLDDCLLVDLRWVRTLVFYTLEQLYDCGKWETLAHFALLYNSYTRERYV
LSIAPLLVHSQRKLLERIASFGGPAVPQPHHVKTQKATGEKITYRNYASCQLLSGWTQYV
SQEEPTAKKDALSLKASEMQRSMSLVCVPLDVEDTLSCYREALDKSPHCLQVLQHSRSLV
VQLLAGSQLSQFPNHQDRSLSLSPTQATFSPAVLLTPNLLPHDLHEDDFRTPSAIYRHPI
SLKSIPVVAAAYLNSIKDLHANGHDSLQILALHEMGNLRFFAGNISAAHSCWSKAVDRAF
QSSGVIQKWDGVSFQSTSLQNAVKRAGIWGCLQGAVLTAKIAQFVLTSDIDERTNCCLLS
AHFFKSVLDCSLAHPQSNIQYASYTFGDELFPGVNLFSEPHRLQIDTTVTSLHFLCYWLF
TTGYYLTLLPILALYIHLVGPVCRDVQRTAEAKILKVRALTELCMFTEAITEAVQLIQGA
DLMLPSGLYFPKKDLQPVRKFCSNKSLPDNLEALEDLMNCDFTSEVCKLYGPTLCSRFQL
ARIQLIIAITKSEPGSSVSGSEESCDDTKNKEVDRECDEQERREREGSSPKAEILLCNEK
EKPSPERIKCLLLEGASTLLSSAMQQFTSHRCSEAENLELTLEFNLLKANLFLQQGNFAL
SSEIAVSCLVLLQTSPVIVRPSPPGSEQDAKDCSVSQSLDEDSPRAVEARERTGALLWLR
CRLALIHSLTASLPSMATLFPGKNINKDIAVLIQEGMDECVQWGDRDIQALLMVQAAELE
AQIGRTDESMATLQKAVNLLLERACMPPWSVLTLAQATLLFSDLKNNRSSTLLQLTRKLL
EKQLFLLGQNLTSIDGNMKFSPPGPRNIYLPFLSMLNRINGQIGK
NT seq
7338 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaatggactccagccgcgaccatagcgtgtgtgttaaagggctaaaaatgctc
ttggatatacagaaaaagtacaaacaccgactaccagacgagttttaccaggagcagatg
ttgcaagttgcagatattctttgtgggctcaagctctaccagctggctctgtggcagggc
tacagtctgtacctgctgcagtttagctcggtgcaaataactgacattacagatgtggac
cacttcaatgcctgctacttcccagaaggatttggtctggagcaacgcacatttactatg
aagacccatgcaatgattggttgcaccaagtgtatctttgaggaagagaaaaagtgcagc
accctcagccagaagggactctgtaaactattgaaattgctgaacttcattaggatcatg
atgcaggcatttcagcagcatgaacacctcttctggcagatctataatggttcattgttt
atctacaacatctgccgttacttgatgactatgaattacagtgagcaggcactggagtac
cttctgtgggcgagtatcagtttggagctgtctgtccctttgatgacagccagatatctg
ccactgattacagcgctctactgttctgtctgccagtgttactatgacaaccaggctaaa
gagcaggcagaggaatttgctaacagagcccttggaaaaataaatgagctggctaagctg
gaaacaccgactgacgccaccaacaaagaagctcagaaagcttacagagaagcttctgtg
aagcttggtgctttggtgttcaagcgggcggtctttaacagcagaggagaacctaaaacc
atacgctcccttaaagacatccccaatgccccatggcctcgtaccctaacagagacgatg
ctgattagccagtttgactgcactgcaggacaatttttggccattttggaggcactttgg
gacagcagcacacgtccgctgcacataacggtgccagataatgcagaaacacaaactgtg
gtccttgagctcctatctgcaggcatgagcatcttatctggagtcaaaagtaccggtaaa
caatctgatgataaacaatacctatctcctaacatactgacatccgcttccactctaatc
gatttggcaattaaaggtgagaaccaagtatcggttatgtctgcagtgagattcatcaaa
ctgttgtttaattacaatcagccagaagaattctcagaactcaccaaggcgatgctacac
catttgtctggtttggagggtcagcctttcagaaaggcagaagttgatctcaacttactg
cactgtttcaaaaacctgctgttttctcaaggagacagtcctaaagaggacaaaaaagat
gacacaagaggacccttttcctacatgagcaatgagtttcttgacttggttgacactttg
cgtttgtccacttgtggctctgactctgaactgtggccagacccagacctcagttttgat
gcttttgtatttctgtggagcaaactaagaatgatcatgcaaattcatcacctggaagct
ccagaatctcagcatgatcgccagaaaatcgattcttatggcaagtgtctgtggtgtctg
tcggtgctgagtgaggtagcccttacttgtgagctggcaaatgtcgactgcataatgacg
gcagagatgcacctgatgttgggtaaacagcttgagaaagcagcagaccgtattaatcaa
actgaggagtcagctgttggtggatatgttaaagtgaagccacggccgttttctctcctt
gagaggtcgaacacagacctgctaaaaaaggtctgtgaagtgacaaagaaggctcaagaa
gccttgtcaaagggtgtctctgctctgattcccctggatcactcagccatcactgatact
gcctgcatgcagaaatatatgtcccctcatccctcgactgtatcttcaacaacaacatca
gaagaaaaaaatagaacagatgaaagctctttcaaggcagaagaagaaaaggaaactaag
acagagtctgaaaataaaggccatcaagacacagagtccaaacatttgtttattctggtg
aaggatctataccttcagctggatatcatctacgtcaaggcttctgtcaagttactgcag
cttaatgaagttacagagtctgacctgttggatcgcatcaagaggaacaaggtgtccaaa
gctcatttaatgatccagaaagcatcagtggagcacagcagagggggaccaaatgaaagc
agcaaaatcaaaagcctgctagaggaagccaccatcctgatagaaaaagctgaactggag
gaaagaaaaatatacatggctaacgttaagaatcccggacgaaagaaggacaaagcagga
cctggggaaaactctccagctcctccaattttactgtcacgaacagacaactcctttacc
tttgctcctgcgccatatgacttagaaagacaggtgagctggtaccagctttgtgggcgt
gcagtccaggggattaaccagaaagtccggcttggtgactgcagtataccaggaactggg
attttggttccagtggtttctggtgagtgttttcttatggtaaagggcctccagtcaaac
cagaagtatgtgtttgctgtagcagcctatgacagccagggaaagctactgggcgatgct
ataggggatacaacattacctataatagcatgtatgcctgtcccactgctttgtacatgg
gcttacttggctcaggtggcttttcaaacagagcagtatgctgtatctaaaaaagcctgc
aggaagctatggagtcattacacagatccagactgtttatctaaaagcgaactaaacaga
ttttcttccactcggcttcgaaaggaaacactgcaaaactcctctcctcacctttgccag
atgttcttggcctccatcttcactgaaacagagatcaatgttcagcaggcctccctccac
tgggcttcattcagtaacagtgggccatttatctgggaacaggaagccaagatagcagag
tgcgagaggatgctgttggccattgacttggcgatgtatttgaatgatggcaggactgct
ttacgagctgtagttacttgctacatgattttggctcctctcatctactatcaaatctct
tgcgatcctgtggtgcaagtacttagaaagtgtctggtgtttttgaaggagaattcatct
cttttaaagcaaagagggaccggatacacttcagagtccattatgcacatggttggctgt
atcacttactacctgtcaaaggttcagtgtaatgatgggcacaatctactccaggagctc
tttaaagcacattctaaacctagcacacttccttggcaagctaataaagcaggggctcaa
gctgcaaacgatggtctaaggaagatacgccaccagatcaaagcactgcatgtgaagaac
aaaaaaagcatagtctccaagacaaagcttaacaaagacactgatattttatcgactacc
gttgaggatcccaccctactgtatgaactgttatcccgctgtacactacaggatagctac
aacaaagtcatgaagctcacagggaaaacttatttccttgagtttgctgtactacttcta
cagaggaccttggaagagggtagggcagacctcgtgctgatctgtggacaaaacattcat
gaggttctctccagaaaacacaaggaaatgttgggacaaaccaaaaaccgtgtaagggga
atcagcaatagcaaaggaggaagtaactcaccggctacaaagataagagatttgcctcag
aacgttcccacatatgaacatacgcaaaggaagctaaagacgaaaataccacacagcctg
ctaaagaatctgagaactaacagggagatactcattgtggaaaattcactggctatgatg
tctaataaagtgtatcgccacagaaggctgcttaagctgaggaacttaacggccaaagag
agagcatggagatctttctccaactactgcatggctatggcacatttagcacagttctac
cagggcctggaactgatgcatggaacacagctggagcagaggtacagccagcttggtgct
cggtgtttatctttcgcctactccggtatcatcatgaggaaggattctctgccgtcttct
gaaaataaacttgaattgaagaaaaactcttgccttagggaggatatactgaaagcagga
aaacaaacgacacacaaggaagctgtcagagacgatgtgtctattacgaaggaaattatt
ggcgagagagagggatcctttaaaagccaggacaaatccattgagacatccacaagcaat
tttggatcactgctggattcagttaaaaatgctgctttatatcttcgcagagcaatggtg
ctggcccaccgtggaagccactggacaactctgcagtatgtgtgtcagactctgtgggac
caaaacaacacatttacctctatggtacaacaggttgctttgcaagaaaagcaaccaccg
gttttagctgatcagctgcatgccatcttcacccctattctggtgctggccattgatctt
atgctggacatgctggataaactgcagatttggcgtttgtatgatctcgactctactgtt
gaagaacttgaatcctgtctccacttctcagcccccctcgatgactgcctcctggtggac
ttacgctgggttcgaaccttggtgttctacactcttgagcaactttatgactgtggaaaa
tgggaaaccttggcacacttcgccttactttacaactcgtacacacgggaacgttacgtc
ttgagcatagctcctcttctggtccactctcagaggaagctgcttgaaagaatcgcctct
tttggaggaccggcagtcccacaaccacaccacgtcaagacacagaaggccactggggag
aaaataacctacagaaattatgcaagctgccagttgctcagtggatggactcagtatgtg
tcacaggaagagcccactgcaaaaaaggatgcactttccctaaaagcttcagagatgcag
cgctccatgtcactggtctgcgttcctctggacgtagaggataccctgagctgttatcgc
gaagcccttgataaaagcccgcactgtcttcaagtcctccagcacagtcgttcactagtg
gtgcagcttttagcaggctcacaactctcacagtttccaaatcatcaagacagaagtctc
agcctttcaccaacccaggctaccttcagccctgcagttttgctcactccgaatctgcta
ccgcatgacctgcatgaggacgactttagaactccaagtgccatctaccgccatcccatt
agtctcaagagcataccagttgttgctgctgcatacttaaactcaatcaaggacctccac
gctaatggtcatgactcccttcaaattttagctctgcatgaaatggggaacctacgattc
tttgctggaaacataagtgctgcacactcctgctggagtaaagctgtagaccgggccttc
cagagctctggtgtcattcagaaatgggacggggtttcctttcagagcacctccttgcaa
aatgctgtaaagcgagctggtatatggggatgtttgcaaggcgctgtgctcactgcaaag
atagcacagtttgttttaacctctgatatcgatgagcgcaccaattgctgtctgctgtct
gctcatttctttaagagtgtgctggattgttccttggctcaccctcaatctaatattcag
tatgcctcctacacctttggggatgaactgtttcctggcgtcaaccttttttctgagccc
cacaggcttcaaattgacaccacagtgacaagtcttcactttctttgctattggcttttt
accacaggctactacttaacgcttctacccatactggctctttacatccacttagtgggg
cctgtgtgcagagatgtacaacgcacagctgaagccaagattcttaaggttcgagctctc
acagagttgtgcatgtttactgaagccatcacagaagctgtgcagctcattcaaggagca
gatctgatgcttccatcaggactctactttcccaaaaaagatctacaacctgtgagaaaa
ttctgcagcaacaaatctcttcctgataatctggaggccttggaagaccttatgaactgt
gacttcacttcagaggtctgcaaattatatggtccgactctatgctccaggttccaactg
gctcgtattcagctaatcatagctatcaccaagtctgaacctggcagctctgtgtcaggt
agtgaagaaagttgtgatgacaccaaaaataaagaagtggatagagagtgtgatgagcag
gagagacgagagagagagggatccagcccaaaagcagagatccttctttgtaatgagaaa
gagaagccatctccagaaaggatcaaatgtcttttattggaaggagcctccaccttgttg
tcctctgctatgcagcagttcacttctcatcgctgcagtgaggccgagaacctggagctg
actttggagtttaaccttcttaaagctaacctcttcctgcagcaaggaaactttgcactt
agctctgagattgcagtttcctgtttggtgttgctgcagacatctccagtcattgtgaga
ccatcccctcctgggagtgagcaggacgccaaagactgcagtgtgtcacagagcctggat
gaagacagtcccagggctgttgaagctcgtgagagaacaggagctttgctttggctgcgc
tgccggctggctctgatccacagcctgactgctagcctccctagcatggcaactcttttt
ccaggtaagaacattaataaggacatagctgtactgatacaggagggaatggatgaatgt
gttcaatggggagaccgagatatccaagccctgttgatggtgcaagctgcagaattggaa
gcacagataggaaggacagatgagagcatggcgacgttgcagaaagcggtgaatttgctg
ttagaacgagcctgtatgccaccttggtcagttctgactctggctcaagccactttgctg
ttcagtgacctaaaaaataataggagttcaacacttctccagctgacaaggaaactcctg
gaaaaacagcttttccttttgggtcaaaatttaacatcaattgatggaaatatgaaattc
tctccacctggaccaagaaatatctaccttcctttcctcagcatgctgaacagaatcaat
gggcaaattggtaaataa
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integrated database retrieval system
