Cyprinodon variegatus (sheepshead minnow): 107089831
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Entry
107089831 CDS
T06110
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107089831 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107089831 (nfrkb)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
107089831 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
107089831
NCBI-ProteinID:
XP_015238318
Ensembl:
ENSCVAG00000013990
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MDPLEHMLTDPLDPKEEDGGQITEECMLGNCKVDLPEDLLEDPDIFFSVLSEGTWNDVLT
DSQRQHLRQFLPQFPNNNTEEQESTIRDLFNNTNFHFGNPLHLAQRLFRDGYFNPEVVKY
RQLCAKSQRRRQLHSLQQYYHRLLKQILVSRKELLDFAVQNGLDFPPKRRLPNKTQAEMR
DLRVRRRLNRILKEVKAECEDSNASSDEDDISLWNATPPSPSSPTATVSLRVLPSLSTPD
MKVTDKAELGELDLKVMLHHHREKRKRQPDHPDLVTSDIHLGDILSRANIGRKGPLPALF
DLPLPKKKMRDERKKKKLKAIKIESEDPCEILTPSDSCSAPPVNIINSLPDTPSTPLTNI
KEEIVEEAQSSPVALEEITASFFSLLENIFRSEGPASTLMLEDKVQTWQSSPASSLNAWF
SSASCWSDLVLQALQFLAGETKDGMMALPSGFSPFVEFVEEFQQWRWIGPTQDTEKDLSA
LCQLWLDSKDFVVKTENEDMLEFTSSTPKLSTDYVVRPSTGDEKQVFQVQEQQRYNQPHK
AFTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGE
GTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRHR
SQEEFERIHQAQAAAAKARKAQQQKPKPASKPKTGSKDGGSKTPGSLDAGLDLACNSMSP
VPSTPTPNTPGTPKSPLPLSATTPTKAGVPDTMKSSPGVLLVSPPSLPQLGTILPTSQAC
PPASQPVTSQQAARIVSHLAASSLPQVRVVSAQPGLGPPAVTQQATLVHQTTHQIRMPVS
VAAKSLSQAVVSVPLRSPSCTSPVQVPTTLSVSTLTVTKPQTGSPGSPANNPTSPAVLQG
VTSPNIKQVSITGQLGMKTAGGAGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRIT
PDMMATLAKSPVATVKLTSDFLGGAAAGSKSISATLHVAPSHPSPSTASGTPPSAAEALT
AKSSPVASALLKAGGDTAIRLMPTLAVSVADQKPRTFSTVASPDKSGATIRIMPGLGVIP
QKQGQTITMTTASGSKPLTASTCANIVTMAASVVAGAKGITVAPGASASPLSLGAATATV
RQVPASVVTTQTGKLPARITVPLSVLNQPLKSKSVVTTPLVKGNLNTNISSLGRNIILTT
MPAGTKLIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVPAQQIQHHVAATSPKSVSTVV
VTTAPSPKCAPDPPPAPQQ
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggatccgctggagcacatgctgacagaccctctggatccaaaagaggaagacggagga
caaatcactgaagaatgcatgcttgggaactgcaaagtggacctcccagaggatctgctg
gaagatcctgacatattcttctctgtgctgagtgaagggacctggaatgatgtactgaca
gattctcagaggcaacatcttcgacagtttctgccacagtttcctaacaataataccgag
gagcaggagagcaccatcagagacttgttcaacaacacaaactttcattttggaaaccca
ctgcatcttgctcagaggctattcagagatggttacttcaatccagaggtggtcaagtac
agacagttgtgtgccaaatcccaaaggaggcgacaactgcattcacttcagcagtattac
catagactcctgaagcagattctcgtctccagaaaggagctgctcgactttgcagttcag
aatggtctcgactttcctccaaaaagacggctgccgaacaaaactcaggcggaaatgcgt
gacttaagagtgagaagaagactgaaccgcattctgaaggaggtcaaagctgagtgtgaa
gacagcaacgcctcctctgatgaagatgatatctcactgtggaacgcaacccctccgtct
ccctcctctcccactgctactgtctcgctccgagttcttcctagcctctccactccagac
atgaaggttacagataaagctgaattaggtgaactggatttaaaagtcatgctgcatcac
catcgtgagaaaaggaaacgccaaccagatcatccagacttggttacctctgatatccac
ctgggggatatactttcaagagcaaatattggccggaagggccctttgccagcacttttc
gatctgccgctgcccaagaagaaaatgagggatgaaaggaagaagaagaaacttaaggca
ataaaaatcgagtcagaggatccttgtgaaattttgacaccttcagactcctgctcagcc
ccaccggtgaacatcatcaactctctgccagacacgccctccacgccgctcaccaacatc
aaggaggaaattgtagaggaagcccaaagcagccctgttgcactggaggaaataaccgcc
agtttcttcagcttgttggaaaacatcttcagatcagagggtcctgccagcaccttgatg
ttggaggataaggttcagacgtggcagtcctctccagccagttcgctcaacgcctggttt
tcctctgcctcatgttggtcggatctggttcttcaagctctccagtttcttgcaggagaa
actaaagatggcatgatggcgctccctagtggcttttcaccatttgtggagtttgttgaa
gaattccaacagtggaggtggattggccccactcaggatacggagaaggatctcagcgca
ctctgtcaactctggctggactccaaagattttgtcgtcaagacagaaaatgaagacatg
ttggagtttacatcatctacacccaaactttcgactgactatgtggtgcgtcccagcact
ggagacgagaaacaagtgtttcaagtccaggagcagcagcgatataaccagccccacaaa
gcctttaccttcaggatgcatggctttgagtcggtggtgggtccagttaaaggcgtgttt
gacaaagaaatgtccttgaataaagccagagagcacacactgcttcgttcagaccggccg
ccatacgtcaccatcctctctctggttcgcgatgcagctgccaggttacccaatggagag
ggaacaagggcagagatctgtgaacttttgaaagactcgcaatttcttgctccagacgtc
acaagcgcacaagtgaacacggttgtcagtggagctttggacagacttcactatgagaag
gacccctgtgtgaagtatgacatcggccgcaagctgtggatttacctgcaccgccaccgc
agccaggaagagtttgagaggatccatcaggctcaagctgcagctgcaaaggcaagaaaa
gctcagcagcaaaaacccaaaccagcgtctaaaccgaagactggaagtaaagacggagga
agcaaaacacctggatctctggacgcaggactggaccttgcttgtaactccatgtctccc
gtcccttcaactccaaccccaaacactcctggaacccctaaatcaccgcttcctctctct
gctaccacaccaacaaaggctggagtcccagatacaatgaagtccagcccaggcgttctt
cttgtctctccgccatcgctgcctcagctgggaacaatcctgcctacaagtcaggcttgt
ccacctgcctcgcagccggtaacctcccagcaagcggctcggatagtgagtcacctggca
gcgagttccctcccccaggttcgggtcgtttctgctcagcctggcctgggtcccccagca
gtcactcagcaggccacactcgtgcatcagaccactcaccagatccggatgcctgtgtca
gtggccgccaagagcctttcacaggctgttgtttccgtgccgctaaggagtccgtcctgc
actagtccagtccaggttccaaccaccctttctgtgtcgactttgaccgtaaccaaacct
cagactggatctccaggtagccccgctaacaaccccacctctccagctgtgctgcaaggc
gtcacctccccgaacataaaacaggtgtccattactggacagctgggaatgaagactgca
ggtggagcagggattccaataaccgcaacaaacttgcgtatccagggtaaagatgtcctc
cgtcttcccccatcctccatcaccacagatgctaaaggccaaacggtgcttcggataacc
ccagacatgatggctactctcgccaaatctccggttgccaccgtaaaactgacctctgac
tttctgggcggggcggccgctggcagtaagagcatatcggctactctccatgtagctcca
tctcacccatccccgtctacagcctccggtacgccacccagcgccgcagaggcgctgact
gctaaatcaagccccgtcgcctctgctttgctgaaggctggaggagacacggccataagg
ttgatgccaacgttggctgtcagcgtggcagaccaaaaacccagaaccttttccaccgtg
gcgtccccagacaagagcggcgcaaccatccggatcatgccaggcctgggggtcatccca
cagaagcagggtcagaccatcaccatgacaacggcaagtggtagcaaaccgctgacggcg
tcaacatgtgccaacattgtaaccatggcagcaagcgtcgtggctggagctaaagggatc
accgtggctcccggagcctctgcttctcctctgtcactgggagcagctacagctactgtg
agacaagtccctgcttcggttgttacaacacaaacgggaaagctacctgcacggatcaca
gttcctttatctgtcctcaaccaacccctaaagagtaagagtgtggtgacgactcctcta
gtgaaaggaaacctcaacacaaatatcagcagcctgggcaggaacatcatcctgaccacc
atgcctgctggcacaaaactaatagcaggaaacaagccggtcagttttgtcacagcgcaa
caattccagcagctccagcaacaaggacaggcaacacaggttcggatccaaacggttcca
gcacagcagattcagcaccacgtggcagctacttcccccaaatccgtttcaactgtggtc
gtcacaacagcgccttcacctaaatgtgcgcctgatcctccacctgctcctcagcagtga
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integrated database retrieval system
