Cyprinodon variegatus (sheepshead minnow): 107089894
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Entry
107089894 CDS
T06110
Symbol
nphp1
Name
(RefSeq) nephrocystin-1
KO
K19657
nephrocystin-1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107089894 (nphp1)
Cilium and associated proteins [BR:
cvg03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
107089894 (nphp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
hSH3
FPP
NOA36
ANAPC15
Sporozoite_P67
DUF2457
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
107089894
NCBI-ProteinID:
XP_015238411
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MPLKRRGPLQLVQREVDEVKRKVDDLEKEVESQRGSKEEAFQRYQELQLSAEKTLKTLQT
LTKADEPAPVGNYDQRKLEEEVRLQNVLKRLVTLSLKLSPPGPSSEVGKATKNEDSDNND
DDSDDDDDDDSEEDSDSDGTGTGGGSTSEKPPSQSGPEMYTVLSDFKAEQEGDLSVQSGE
VLKIIKKAADGWWLAQDTKGNRGVVPKTFLKISSGVNDEDDQEDDDEDDDEDDEIKQSEQ
EEEEDEDQTDDGKESKASNWSTVRKALTEIDTTDVLSAMGAIPSGFRPSSLTKLLMEEGE
RYRGSHYIQPELSQSQLSFKDLFLDPDTGKVRAREVRNCVCFNVWSCKMIPTPGVGVQVL
SRHIRLCAFDGAQVLSNIHTVRASYTSKNPKTWSFSPRVTSILPTILDGDCFLRCSSSSP
NIGILFELGVTFLRNSTGERGDLSCGWAFLKLTDDGGNPLPNRTYELPVYGGTPYEKDVM
LEATASRRSPGGVFQQMLQARRQPKLIVKLKSPNSRTRTQLSLLPDTLLYCLSCVHLLAL
YRQLLADTLLMDRPTMQNADLICSPILSTFPMLLDQTDLLDALRSVWLEAETSMSRAQKR
DLSYLKQEFSKVYLSSVYFLLHSPSLSSYRWADLPSEEQRARVIYTTLEDLKNHQPTTGQ
SGAPGVFFDSSHSHLAFDIQELTFDLLSATR
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaaaagaagaggaccgctgcaactcgtccagagagaagtggacgaagtcaaa
agaaaggttgacgatctagagaaggaggtggagagccaacgtggatctaaagaagaggca
tttcaaagatatcaagagctgcagctttctgcagaaaagactctaaagactctacagaca
ttaacaaaggctgatgagccggcccctgtaggaaattatgatcagaggaagctagaagag
gaggtacgcctgcaaaatgtcttgaagcgtctggttaccttgtctctgaagctttcacca
ccaggtcccagctctgaagttggaaaggctacaaaaaacgaagattctgacaataatgat
gatgacagtgatgatgatgatgatgatgattctgaggaagacagcgacagtgatggtacg
gggactggaggtgggagtacatctgaaaagccgccatctcagtcgggccctgaaatgtac
acagtcctcagtgatttcaaggcagagcaggaaggagatctgtctgttcagagtggagaa
gtgttaaaaataatcaaaaaggcagcagatggatggtggctggctcaagacaccaaaggg
aacagaggagttgtaccaaaaaccttccttaagatcagttctggtgttaacgatgaggat
gatcaggaggatgatgatgaagatgacgatgaggatgatgaaatcaagcagtcagaacag
gaggaagaggaagatgaagatcaaactgatgatggaaaagaaagcaaagcttccaactgg
tcaaccgtccgaaaggctctgactgagattgatacaacagacgtgctgtcggcaatgggt
gccataccttcaggattcaggccatcaagtctaactaaacttctgatggaggaaggtgag
agatacagaggaagtcattatattcaacctgagctcagccaatcacagctgtcctttaaa
gatctctttttggacccggacactggcaaggtccgtgctcgagaggttaggaattgtgtt
tgttttaatgtgtggagctgcaagatgattcccacacctggagtgggagttcaggtcctc
agcagacacatccgtctgtgtgcctttgatggagcgcaggtgttgagtaacatccacaca
gtgagagcatcttatacctccaagaacccaaagacgtggagcttctccccaagggtgacc
agcatcctgccaactatcctggatggagactgtttccttcgctgcagctcttcgtctccc
aacattgggattctttttgaacttggagtcacttttttaagaaattcgacaggtgagaga
ggagaccttagctgtggctgggccttcctcaaactgaccgatgacggcgggaatccactc
ccaaacaggacgtatgaactaccagtgtatggaggaacaccttatgagaaggatgttatg
ttggaagcaacagcttcaagaagatctcctggtggtgtttttcagcagatgctgcaggcc
cgacggcagccaaagctgattgttaagttgaaatcgcctaacagccggacaaggacccag
ctcagtcttctaccagacaccctgctgtactgtctgagctgcgtccacctgctggctctg
taccgacagctgctggccgacacactgctaatggacagacccaccatgcagaatgcagat
cttatatgcagcccaatactttcaactttccctatgcttttggaccagacagacctgcta
gatgccctcaggagtgtctggctggaagctgagaccagcatgagcagagcccagaagaga
gacttgtcctatctgaagcaggagtttagtaaagtctacctgtcatcagtttatttcctg
ctacactcaccctcactgtcctcgtatcgctgggctgatctgccctcagaggagcagcgg
gccagagtcatctacacgaccttggaggacttgaaaaaccaccagccaaccactggccaa
tcaggtgctccgggagttttttttgactcctctcattctcatctcgcttttgatatccag
gagctgacctttgatctccttagtgcgacacgctaa
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