Cyprinodon variegatus (sheepshead minnow): 107089965
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Entry
107089965 CDS
T06110
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107089965
Transcription factors [BR:
cvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107089965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
107089965
NCBI-ProteinID:
XP_015238544
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MAKPLDHIKRPMNAFMVWSRGQRRKMARENPKMHNSEISKRLGAEWKRLSDSQKRPFIDE
AKRLRVQHMKEHPDYKYRPRRKARAPLSRDRFVFPSLLGDAAVPLDSFLVSADKARTLLA
SSSCSSSSPSPFSLCEPFNAGVAQRISEMPPPVAAGALPYGAHGFGYQSAAFGGLACPGQ
RASPPSPGYVVPCSCSAWSGASLHPQVAYILFPGGISNKGA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacctctagatcacattaagagacccatgaatgcgttcatggtttggtccaga
gggcagaggaggaagatggcccgggagaaccccaagatgcacaactcggagatctccaag
aggctgggcgcggagtggaagaggctcagtgactcccagaagcggccgttcatcgacgag
gcgaagcggctgcgggttcagcacatgaaggagcatccggactacaagtacagaccccgg
cgcaaagccagagcgccgctcagcagggaccgctttgttttcccgtctttgctcggggac
gcagcggttcctctggactctttcctggtgtctgcagataaagccagaaccctgctcgcc
tcctcctcctgctcctcctcctccccgtctcctttctccctctgtgagccctttaacgcc
ggagtcgcccagcggatctccgagatgccgccgcctgtggccgcaggcgcgctgccctac
ggagcgcacggcttcggataccagagcgcagcgttcggggggctggcgtgccccggacag
cgcgcgtccccgcccagcccagggtacgtggttccctgcagctgcagcgcctggtccgga
gcatccctgcaccctcaggtggcctacatcctcttcccaggagggatcagcaataaaggc
gcataa
DBGET
integrated database retrieval system
