Cyprinodon variegatus (sheepshead minnow): 107089984
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Entry
107089984 CDS
T06110
Name
(RefSeq) cadherin-related family member 1-like isoform X1
KO
K16501
cadherin-related family member 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107089984
Cell adhesion molecules [BR:
cvg04515
]
Cadherins
Cadherin related
107089984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Big_9
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
107089984
NCBI-ProteinID:
XP_015238565
Ensembl:
ENSCVAG00000007313
UniProt:
A0A3Q2CKR1
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MALFSISEDTPVGTQVYILNGTDPEGDPVRYGLTFEIGSTEYFRVEPKSGNVTLIQELNR
EKQDEISVTVSITDGRNKVVETVRVFVTDANDEPPEFQNLPFIVDVPEDTTPGSSIYRVH
AVDKDLGSGGSVSYYLQSSPFAKFTIDGHSGILRVKPGETLDYETTPTHFVTVVAKDGGG
KYKGKHQVLTSTATVTINVLDAQDMPPSFVGTPYFGYVYEVSVPGSEIYTVSAKDGDQGN
PNPIHYSILNGSDGVFDINSTSGCIYLTTPPYLLKNELYEIKVKASEVGPDNQLLDYDVT
TVTVRVVDLNNHPPTFYGENGPQSKFEVTMYEHPPAGEILRGFKITVNDSDQGANAKFKL
RLVGPSRVLRVVPQTVLNEAQVTIIVEDASGIDYEKGPTLSFKLLAVEIDTPERFSATAD
IVINLLDTNDNVPVFTSEYYIVRVPENSPGGSSVVSVTANDPDSGSWGEVKYTIYGSGSD
LFAIHPSTGLIFTQPWTSLDAEMRSKYNFYVKAEDSEGKYSIAEVFVSVLDMNDHPPEFD
EDFQEKTMIIGTPVKVQAVDEDAESPNNVIEYSIMTADPDNAFDINADTGEIQLKPFIKS
MEIVQNITKQKDCKWSLVVQARDRGSPSFSTTAVVNIDITEATPLKGPMAAFLMKSRDNP
LRALGLVSFIILVLVGVTVLISTVMYMRNSKSNRIMPVRRIIKRRPRDGQTWKFKIPVIK
LSSPAEKFLISDPESSPSQETSSPRLKPPPPIAPCLPPPPPANIRANERPRAVPTISGAL
TSKALKKTKSCRRKEGNISSALVSELKMKLEQKINENNQGLY
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggccttgttcagcatctctgaggatacacctgtcggaacacaggtatacatcctgaac
ggcacagatccagagggggatcctgtacgctacggcctaacatttgaaataggctccact
gagtatttcagggttgaacccaaatcaggaaatgttactttaattcaggagctaaacaga
gagaaacaagatgaaatctcagtgactgtcagcataacagatggacgtaataaagttgtt
gagactgtaagagtgtttgtgacagacgccaatgacgagcctccagagtttcaaaatctg
ccttttattgttgatgttccagaggacactacaccaggaagtagtatttacagagtccat
gctgtagataaagacctgggttcaggaggcagtgtctcatattacctacagagttcccct
tttgccaagttcactattgacggacacagcgggatcctgagagtaaaacctggcgagact
ctggactatgagaccacaccaacacattttgttacagtggttgcaaaggatggaggtgga
aagtacaaaggaaagcatcaggtgctgacttccaccgccactgtaaccatcaatgttcta
gatgcccaagacatgccgccatcttttgtgggaaccccatactttggatacgtctatgaa
gtctcagtccctggttctgaaatatacacagtttctgctaaagatggggatcaaggcaac
cccaaccccattcattattctattctgaacggcagtgatggtgtttttgacataaatagc
accagtggatgcatctatctaacaactcctccatatctgctaaaaaatgaactctatgaa
attaaagtaaaggcatctgaagttgggcccgacaatcagctgttggactatgatgttacc
acggtgactgtccgggtggtggatcttaacaaccatcctccgacattttatggagaaaat
ggaccccagagcaagtttgaggtcaccatgtatgagcatcctcctgctggggagatcctc
agaggctttaagatcaccgtcaatgactctgatcagggagcaaatgctaaatttaaactg
agactggtggggcccagccgagtacttcgagtggttccccagacagttttgaatgaagct
caggtgaccatcattgtggaggacgcatctggcatagactatgaaaagggaccgacccta
tcttttaagttgctggcggtagagattgacactcctgagcgtttcagtgcgacagctgac
atagtgatcaacttgctggatacaaatgacaacgttcccgttttcacgtctgagtattac
atcgtcagagtgcccgagaactcccctggaggttccagtgttgtgtccgtcacagcaaat
gatccagactctggttcctggggcgaagtcaaatacacgatttatggatcaggatccgat
ttatttgccatccatccatccacgggccttatctttacacaaccctggaccagtctggat
gcagagatgaggtcaaaatacaacttctatgtaaaggcagaagattcagaaggcaagtac
agcattgctgaagtctttgtcagcgtccttgacatgaatgaccatcctccagagtttgat
gaggactttcaagagaagactatgatcattgggacacccgtcaaagtccaggccgtggat
gaggatgcagagtctcccaataatgtcattgagtactctatcatgaccgctgatccggac
aacgcatttgacatcaatgcagacactggagagatccagctcaagccttttatcaagtct
atggagattgtgcagaatatcaccaagcagaaggactgcaagtggtctctggtggtccag
gccagggacagaggatctccatccttcagcacaactgctgtggtgaacatcgacatcaca
gaggcgactcctctcaaggggcctatggcagcatttttaatgaaaagtagggacaatcct
ctcagagctttaggcctggtttcgtttatcattcttgtactggtaggagtgacagtgtta
atctctacagtaatgtacatgcgaaactcaaagtcaaacagaatcatgccagtgcgacgc
atcataaagaggcgacccagggatgggcagacttggaaattcaagattcctgtcatcaag
ttgtccagcccagcagagaagttcctcatcagcgacccggaaagcagcccctcacaggaa
accagcagcccaaggctgaaacccccacctcctatcgctccttgcctgccccctccacct
ccagctaacattcgggctaatgagcggccccgggcggtcccaaccatatctggtgcactg
acttctaaagctctgaagaaaacaaagtcttgtcgccgcaaagagggaaacatcagctct
gcattggtgtctgagcttaagatgaagctggagcaaaagattaatgagaataaccaaggg
ttgtattaa
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