Cyprinodon variegatus (sheepshead minnow): 107090001
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Entry
107090001 CDS
T06110
Name
(RefSeq) protein turtle homolog B-like
KO
K22656
immunoglobulin superfamily member 9B
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107090001
Cell adhesion molecules [BR:
cvg04515
]
Immunoglobulin superfamily
Other
107090001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
Ig_4
Motif
Other DBs
NCBI-GeneID:
107090001
NCBI-ProteinID:
XP_015238590
LinkDB
All DBs
Position
Unknown
AA seq
1325 aa
AA seq
DB search
PPSFTATPPQYVEAKEGGSTLLGCSAQGNPKPMISWLREGEELASNSKYSVHDGSLTILG
ITRDDRGAYTCRAYSDQGEVLHTTRLLVQGPPYIVSPPENVTVNISQNARFNCKAEAYPG
NLTYTWFWEEDNVFFKNDLKLRVRIFVDGTLKIFQVKPEDAGKYTCSPSNSLGISPSASA
YLTVQYPARVINMPPVIYVPRKLPGIIRCPVDANPPVTSVKWEKDGYTLRVEKYPGWSLM
PDGSIRVAEATEDSLGTYTCVPYNALGTMGMSPPATLVLKDPPYFNVRPGGEYRQEAGRE
LVIPCAASGDPDIPTITWRKVGKPSRSKHNILPSGSLQFLSLSKEDHGEWECVATNVVTS
ITASTRILVIGTSPHAPGNIHVLPSTTTANVSWEPGYDGGFEQTFSVWYGPVSKRTDFGP
HDWHSMPVSGAQTWLVVPGLEPGTEYQFSVLAQNKLGTGPFSEVVTVTTAGSPLGTAEPL
VLLTPPRCLTANRTQHGVLLTWLPPANHSSPIDRYIMEFRLGEKWEVLDDLIPSTETELV
ARDLVQESWYEFRVIAVMDDLISESSNVVGVSSTADPFPAPELPEEGLARPVVAGVVATI
CFLAAAVLFSTLAACFVNKQHRRKLKRKPDPPLSVTHFRKSIESPPPLTPLPGVEPCWDE
PARSSFLPPPASPLLSSGKISPESSPPSRPRSLSSEGSHGPGLYVRKLPSPQREKDKELS
FYKKTKRAIASKKYSVSKHEAEVTTPIELISRGPDGRFVMETSPPPRRIQGFPFAEESDM
YPEFRQSDEENDFDPGPLPPIMPTLRPQLSPTSSSLESTQPPTYSPRLHRPMEGMSFAEG
SAPYASGQAPASRYRGFPQGLFYGYLGSRAESGIPPPFYMPDISPRSSALSSPPGTAEGP
FGYPSIPEESEGLEHHQYTASGHSLSHTHSPPLRSPESWQPHELPFLGLEGPRFIYPPHH
PLHHPQDLPDPPPYPPHTLPPSRLHLPPLRDPTSPGLLQLEVPVAPPGRDRPPGPPVRRL
AMQQAQSLGQLRHTAHGVGVPVLPYPDPAARAGSPSTAPSSSPQSWLSPRAGRRADPSLP
PLVLQPSRLSPLSQSPLSTQPGSPDILVRPPPRHGILRTSRSLEMPEITLQPSATVSFSR
RSSLTASPTQSQGAKQPSPSYPMSYASTAASYPSQSPSPPPEGRDVFGQRPSQRRTEEEM
LPSEPSQLQISASGEPLGASSDTAGSESLTALLHHCITKAKGVATNNNNNATSVRRTGLS
PSQTQQQSQTPKEGEDPNHHIKNKKQSKNPYSYLTSFLHRRTSEEDQTGILASADSEGPN
YGTLR
NT seq
3980 nt
NT seq
+upstream
nt +downstream
nt
ccccaccttccttcacagcgacaccaccgcagtatgtggaagcaaaggaagggggaagca
ctctgctcggctgctctgcccagggaaatccaaaaccaatgatcagttggcttagagaag
gggaggagcttgcatccaactcaaagtactcggtacatgatggcagtctgaccattcttg
gcatcacccgggacgacagaggggcatacacctgcagagcgtacagtgaccagggagagg
tacttcataccacccgcctcttagttcaaggacctccgtacatcgtgtcgccaccagaaa
acgtcaccgtaaacatatcacagaatgcacgcttcaactgcaaagccgaggcctatccag
gcaacctgacctacacctggttctgggaggaggacaatgtcttcttcaagaatgacttga
agctccgagtgcgcatcttcgtcgacggcaccctcaagatattccaggtcaagcccgagg
atgctgggaagtacacctgcagtccgagcaacagcctcggtatctcaccgtcagcatcag
cgtacctgactgttcagtaccccgcccgagtgatcaacatgccccctgtcatctacgtcc
cacggaaactgccaggtatcatccgctgccctgtggacgccaacccgcctgtgacatcag
tgaagtgggagaaagatggctacacactcagagtagaaaagtaccctggttggagcttga
tgccagatggaagtatccgggtggcagaggccacagaagactccctgggcacctacacct
gtgtgccttacaacgccctgggtacaatgggcatgtccccccctgccactttggtgctaa
aggatcccccttactttaatgtgaggcctgggggggagtaccgtcaggaggctggaagag
agctagtaatcccttgtgctgcttctggagaccccgatataccaaccattacctggagaa
aggtggggaagccaagcagaagtaaacacaacattctacccagtggcagcttacagtttc
tatcgctcagcaaggaggatcatggagagtgggagtgtgtagccaccaatgtggtcacaa
gcatcactgccagcacacgtattctagtcatcggcaccagcccacacgctcctggcaata
tccacgtgttgccatctacgaccactgcaaatgtttcctgggaaccaggctatgatggcg
gcttcgagcagacattctcagtgtggtatggtccagtgtctaagagaacagactttggtc
ctcatgactggcattcgatgcctgtttctggtgctcagacctggttggtggtgccagggt
tggagcctgggacagagtaccagttcagtgtgttggctcaaaacaaactgggcacaggtc
cattcagcgaagttgtgacggtcaccaccgcaggctctcctctgggtaccgctgaacctc
tggtgcttcttactccaccacggtgcctcacagccaatcgcacgcagcatggtgtcctcc
ttacatggctacccccagctaaccactcctcacctattgaccgatatatcatggagttcc
gcctcggggagaagtgggaggttcttgatgacttaatcccatccactgagactgagctgg
tagcaagagacctggtccaggagtcctggtatgagtttcgggtgattgcggtcatggatg
accttatcagcgagagcagcaatgtagtaggagtttccagcacagcagaccccttccctg
ctccagagttgcccgaagaggggctggcacgccctgtggtggcaggcgtcgtggcgacca
tctgttttctggcagcggcggtactctttagcactcttgccgcctgcttcgttaataaac
agcaccgtcgaaaactcaagcgtaaaccagaccctcccttgtcagtgacacacttcagga
aaagcattgagtcaccgcctcctctcacccccttgccaggggtagagccctgctgggacg
agcctgccaggagcagtttcttgccccctccggccagccccctgttatcgtcggggaaga
taagtccagagagctcccctccatctcggccccgctctctatcatcagaaggttcccatg
gtccaggcctgtacgtcaggaagctgcccagccctcagagagaaaaggacaaagagctct
ccttctacaagaaaaccaagcgtgccatagccagcaagaaatacagtgtgtccaaacatg
aggcagaggtcaccacgcctatagagctgataagccgaggccccgatggccgctttgtta
tggagacaagtccgcctccccgccgaatccagggcttcccctttgcagaggagtccgaca
tgtacccagagttccggcagtcggacgaagagaatgattttgaccctgggcctttgccac
ccatcatgcccacgctgcgaccccaactctccccaacgtcctccagcctggagtcaacgc
agccccccacctacagccctcgcctacacaggcccatggaaggtatgagctttgcagagg
gcagcgcaccttacgcctcagggcaggccccagcctcccgctacaggggctttccccagg
gcctgttctatggttatctaggcagtcgtgctgaatcagggattccaccaccattctaca
tgcctgacatcagcccgcgtagctccgctctttcctcaccaccaggcacagctgaggggc
ccttcggttacccctccatccctgaggagagtgaaggattggaacaccatcagtacactg
cctctggccattctctgtcacacactcacagccctcctctccgctcacctgaaagctggc
agcctcatgagttaccctttctgggcctagagggcccaaggttcatatacccacctcacc
atcccctacatcacccccaggacctccctgacccacccccataccctccccatactctcc
cccctagtcgcctgcaccttccaccccttagggatccaacgagccctggactcctgcaac
tggaggtccctgtggctccaccaggcagagacaggcccccagggcctccagttaggcgtt
tagctatgcaacaggcccagagtctcggccagctcagacacacggcccacggtgtgggtg
taccagtgttgccttaccctgacccggcagcccgtgcagggagcccaagcacagccccca
gtagtagccctcagtcttggctcagcccgagggcagggcgccgggcagaccccagcctac
ccccactagtactacaaccctcccgtctttctccactctcccagagcccactcagcaccc
aaccaggttccccagatattctagtgagaccccctccacgtcacggcatcctccgtacct
ctcggtctctggagatgcccgagatcaccctgcagccctcagccactgttagcttctctc
ggagatcctcgctgactgcctctcccactcagagtcagggcgccaagcagcccagcccca
gttaccccatgtcctatgcctccactgcagccagttacccttctcagtccccctctcccc
ctccagagggcagggatgtttttgggcagaggccatcccagagacggacagaggaggaga
tgctaccctcagagccctcccagctccagatctcagcctcaggggaacccttaggtgcgt
ctagtgatactgccgggtctgagagcctaacagcactgctacatcactgtataactaaag
ccaagggagtggccactaacaacaataacaacgcaacatctgtgagaagaacaggcttat
ctccctctcagacccagcagcaatctcagacacccaaagagggagaagatcccaatcacc
acataaagaataaaaagcaaagcaagaacccatacagctacttgacatcgttcctgcatc
gcaggacgtctgaggaggaccagacaggcatcctagccagcgcagactctgagggcccaa
attatggaactctacgctga
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