Cyprinodon variegatus (sheepshead minnow): 107090006
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Entry
107090006 CDS
T06110
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107090006 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107090006 (vti1a)
Membrane trafficking [BR:
cvg04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
107090006 (vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Mer2
Laminin_II
Sec8_N
BPS1
CAP59_mtransfer
LamB_YcsF
DUF5344
DUF1664
Motif
Other DBs
NCBI-GeneID:
107090006
NCBI-ProteinID:
XP_015238619
Ensembl:
ENSCVAG00000007535
UniProt:
A0A3Q2FM20
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MSSDFETYEQDFGTITAEVTNKIGKIPKLSGEEKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRAMYNSRLKSYKQEMEKLEKDFKRSRIAYSDEVRNELLGDDAISSEGQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQVGQEILSNLHTDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRVLVFVLGAFILLTIILAIYLNVRRH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagactttgagacctacgagcaggactttggaactattaccgcagaagtaact
aacaaaattggtaaaattcccaaactaagtggagaggagaagacacagctggttctaaat
gtcgacaaacagcttgaagaagtcagagagctgcttgagcagatggacctggaggtgcgg
gagatccccatccagagccgagccatgtacaacagcagactgaagagctacaaacaggag
atggagaagcttgagaaagactttaaaaggtcacgtattgcctacagtgatgaggtgcgc
aatgagctcctgggggatgacgccatctcctcggagggccagctgataaagttacgtgaa
gagagagcgcatctattggacaacacagaaaggctggaaaggtcatcacggagactggag
gccggctatcagattgcagtagaaaccgaacaagtgggacaagagattctttccaacctt
catactgatcgtgagaagattcagagagcgagagaaaggctgagagaaacggacgccaat
ctgggcaagagttctcgcatcctcaccggcatgctgagaaggatcatccagaatcgcgtc
ctggtctttgtcctcggagccttcatccttcttaccatcatcctggccatctatttaaat
gtgcggaggcactga
DBGET
integrated database retrieval system
