Cyprinodon variegatus (sheepshead minnow): 107090020
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Entry
107090020 CDS
T06110
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107090020 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107090020 (exosc4)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107090020 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
107090020 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107090020
NCBI-ProteinID:
XP_015238640
Ensembl:
ENSCVAG00000006625
UniProt:
A0A3Q2DTW6
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MAGLELLTDQGYRLDGRKASELRKFQARMGVFAQADGSAYLEQGNTKALAVVYGPHEIRG
SRSRALHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLFPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALVQMDARLHQDHLETLIEAAMTACKGVSKVLDEVVRQHLQEAS
VHSRE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcggggttggagctgctcaccgaccaaggataccgcctggatggaagaaaagcctcc
gaactgcggaagtttcaggcccgtatgggagtgtttgcccaggcagacggttctgcttat
ctggagcagggaaacaccaaggctctggctgtggtttacggtccgcatgaaataagagga
tccagaagtcgggcccttcatgatcgagctgttattaactgccagtacagcatggccact
ttcagcacagctgagaggaagaggagaccgcatggagatcgcaaatccacagagatgagt
ctccacctgaagcagacatttgaagctgctgtgatgactcagctcttcccgcgctctcag
attgacatctatgtgaagattctgcagtcagatggagggaactacagcgtgtgtgtcaat
gcagctacccttgcggtcattgatgcgggcatccccatgagagactacgtctgtgcctgc
actgtaggctttgttgatgagactcctcttgctgacctttgctatgccgaggagagtgga
ggagtgagctctctggctttggctctgctgccccggggcggacagatcgccctggttcag
atggacgcccgacttcatcaggaccacctggaaaccctgatcgaagctgcaatgactgct
tgtaaaggggtgagcaaggtgctggacgaggtggtgaggcagcatctccaagaggcatct
gtacactccagagagtaa
DBGET
integrated database retrieval system
