Cyprinodon variegatus (sheepshead minnow): 107090094
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Entry
107090094 CDS
T06110
Name
(RefSeq) uncharacterized protein LOC107090094
KO
K23310
PHD finger protein 6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107090094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107090094
03009 Ribosome biogenesis [BR:
cvg03009
]
107090094
03036 Chromosome and associated proteins [BR:
cvg03036
]
107090094
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107090094
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
Other ribosome biogenesis factors
107090094
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
107090094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
DUF7311
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
107090094
NCBI-ProteinID:
XP_015238765
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MSRGCAVTCVLCGRSQECPKTGTLSTKDQITAHENCLLFASGIFCTSTPQFDDLFGFSVT
DVQKEVKRGRKLTCSGCKKKGATAGCEVGRCKRTFHYPCAVEGGAKTFENNDDGKYGLYC
VRHSNTENGSSENKRKKSPSFKNPGEVASLKMFDCVSFLFFQRQLSFNEEEEKSPSSRRS
FKRKRILSDSSNTDEEGLLPPLESDLEDSVQEQESAQSLPISKFSKNPPGSSAGIPAENV
NTDVHNEENETLVHSERDSRGPRESGGNVQRRSTRKHTELDAESESLLSGVAVGTMLLLN
PALAAVTEESRHIQMVETEVQTVKREIEEFVFEEDLVQAYEEPVLKPSVSVPQQSSTASP
QHSKPSSSVPFSSFKEVLPESICVTIPPPPSPSPSEEWPTPLAPLPREVALAHPPEPPSP
HAPLITEPAGTPPSDPKPDIDSASFWRNCNAAGFTEAIFTDFITEINNMFSRIQDERASQ
EDYDRALSMIMDSGRLADLVTKQEEELERRRLELQRASAALKDVVSALQK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaggctgcgcagtgacctgcgtcctctgcggtcgctcccaggaatgtccaaaa
accggaaccttatcgaccaaagaccagatcacggcgcatgagaactgcctgctctttgct
tcgggcattttttgcaccagcacgccacagtttgacgacctgtttggcttctctgtcaca
gacgtgcagaaggaggtgaaacgaggacgcaaactgacctgtagcggctgcaaaaaaaag
ggggccacagcagggtgcgaggtaggacgctgcaagaggactttccattacccgtgtgct
gtcgaagggggagccaagacgtttgagaataatgacgatgggaaatatggactgtactgc
gtgcgccacagtaatacagaaaacggcagttcggaaaataaacgcaaaaagtccccatcc
ttcaagaaccccggcgaagttgcatcgctcaaaatgtttgattgtgtttcgttcttgttt
ttccagagacagctgagtttcaatgaggaagaagagaaaagcccatcgagtagaagatca
tttaaaaggaaaaggatattatccgattcttcaaacacagacgaggaaggacttttgcct
ccattagagtcagatttggaggatagtgtacaggagcaagaatcagctcagtcccttccc
atcagcaagttctctaaaaaccctccaggttcctcagcagggattccggcggagaatgtg
aacacagatgtacacaacgaagagaatgaaacactcgtacattctgagagggatagcaga
ggtccaagagaaagtggaggaaacgtacagagaagatccactagaaaacacactgaactt
gatgcggagtctgagagtttgctgtctggggtggcagtcggcaccatgcttctcttaaat
cctgcacttgcagctgtaaccgaggagagtcgccacattcagatggtagagacggaggtg
cagacggtgaagagggaaatagaagagttcgtctttgaagaggatctggtccaggcttat
gaagaacccgtcctcaaaccctccgtctccgtcccacagcagagctccaccgcttcccca
cagcactccaagcccagcagctctgtgccgttctccagctttaaagaagttctgcctgaa
tccatctgtgttactatcccccctcccccttccccctctccttcagaagaatggcccacc
cctctagcacctctacctagagaggttgccttagcacatccaccagaaccaccctcccca
cacgcacccctaatcaccgagcctgccggaacacctccatcagacccaaagcctgacatc
gactcggccagcttctggagaaactgcaacgcggccgggtttacggaggccatcttcacc
gactttattacggaaataaacaacatgttcagcaggatccaggatgagcgggccagccag
gaagattatgaccgggcactttcgatgataatggactcaggaagacttgcagaccttgtt
accaagcaggaggaagaactggaaaggagacgattggagctgcagagggcgtcagcggct
ctgaaggacgtcgtctcggccctgcagaaatga
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