Cyprinodon variegatus (sheepshead minnow): 107090147
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Entry
107090147 CDS
T06110
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107090147
04082 Neuroactive ligand signaling
107090147
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107090147
Ion channels [BR:
cvg04040
]
Ligand-gated channels
GABA-A
107090147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
DUF5522
Motif
Other DBs
NCBI-GeneID:
107090147
NCBI-ProteinID:
XP_015238857
Ensembl:
ENSCVAG00000021190
UniProt:
A0A3Q2GQC8
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MRGCRCGSRMWSRESASSLLICLLVPTALWESRSVKADQGPYDPKENITLFTRILDRLLD
GYDNRLRPGLGDRVTEVKTNIFVTSFGPVSDTDMEYTIDVFFRQSWRDERLTFHGPMNIL
PLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTMRLTVHAECPMHLE
DFPMDFHSCPLKFGSYAYTISEVTYAWTRNASDSVVVEEESSRLNQYDLLGQTVGQETIK
SSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL
TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVS
EKKKERASVMKKNNAYAVAVANYAPNVSKDSTALPTIAKGGALDPGKPRADGKAPEAKKT
FNSVSKIDRLSRIMFPVLFGTFNLVYWATYLNREPVIKDMVPSN
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagaggctgtaggtgtggaagcaggatgtggagcagggagagcgcatcttcactcctc
atctgcctgctggtgcccacagctctctgggaaagcagatcagtgaaagccgaccaagga
ccttatgacccaaaggaaaacatcaccctgtttacacgcatcctggacagactgcttgat
ggatacgacaaccgtctccggcccggtctgggagacagggtaaccgaggtgaagaccaac
atcttcgtcaccagctttggtccggtctcagacaccgacatggagtacaccatagatgtt
ttcttccggcaaagctggagggacgagaggttaacgtttcatggaccaatgaacatttta
cccctgaacaacctgatggcgagtaagatctggactccagataccttctttcacaatggg
aaaaagtctgtggcgcataacatgaccatgcccaataagctgctgcggatcaaagatgac
gggacgctgctgtacaccatgaggttaacagtgcatgccgagtgcccaatgcatctggag
gatttccccatggactttcattcctgtccactaaaatttggcagctacgcctacacaatc
tcagaggtgacttacgcttggactcggaacgcttcggactcggtggtggtggaggaggag
agttcccgcctgaaccagtacgacctgcttggtcaaactgttggacaggaaaccatcaaa
tcaagcacaggtgaatacacagtgatgacagctcatttccacctaaagaggaagattggc
tactttgtcattcaaacgtacctcccatgcatcatgacagtcatcctttcccaggtgtcc
ttctggctaaacagagaatcagtgcctgctaggactgtgtttggcgtgaccaccgttcta
acgatgactactctgagcatcagcgccaggaactccctgcctaaggttgcctacgccacc
gccatggactggttcatcgctgtctgttacgccttcgtgttctccgctctgattgagttc
gcaacagtcaattacttcacaaagcgaggctgggcctgggatgggaagagtgtagtgagt
gagaagaagaaagagagggcatctgtgatgaagaagaataacgcctacgctgtagcggta
gccaactacgcccctaatgtcagcaaggactccaccgctctcccaaccatcgccaaaggg
ggcgccttggaccccggtaagcccagagcggacggcaaggccccggaagccaagaagacg
ttcaacagcgtcagcaagattgacaggttgtcacggattatgttccccgttctctttggg
acgttcaacctggtctactgggccacctacctaaacagagaacctgttataaaggatatg
gttccgtctaattag
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