Cyprinodon variegatus (sheepshead minnow): 107090166
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Entry
107090166 CDS
T06110
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120
Ubiquitin mediated proteolysis
cvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107090166 (syvn1)
04120 Ubiquitin mediated proteolysis
107090166 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107090166 (syvn1)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107090166 (syvn1)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107090166 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-Nse
FANCL_C
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
107090166
NCBI-ProteinID:
XP_015238887
Ensembl:
ENSCVAG00000021438
UniProt:
A0A3Q2DGH7
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MMVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGK
FMRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWL
AEDRVDFMERSPNISWVFHLRVLSLLGLLAVMDFMFVNHACHSIITRGASVQLVFGFEYA
ILMTMVLTTFIKYILHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHT
FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMV
TGAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTQAAAPAPAPAPAAPANA
PAAPAANAPGMLPAFPPGIFPFWGPFPAVPPPAAGAPPPAPGATDPPQSNAEAAQAAGTS
EPASAAADGATSSTAAPGSAIPGFPFSFPPPPFPAAPWLPMPPPPPFVSSMPPPPPSLSR
LTEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRPEGDGAAG
AGGSSQEAAASSTQSSTTEKESSTSDPASGAAVSSQPADSTSSTSESERKENWDEELMED
ENGEPSAAELRRRRLRKLETASPSSSSPPPPPDN
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcgggcagccttggtgacggccaccagtctggcgctgactggggctgtggtg
gcccatgcgtacctgctcaaacatcagttctacccgactgttgtgtacctaaccaaaagc
agcccaagtatggcggttttgtacatccaagcgtttgtgttggtgtttctgctgggaaag
ttcatgagaaaggtgttttttggccagctaagggctgccgaaatggagcacctcatcgag
cgctcctggtacgcggtgacggaaacgtgcctggccttcaccgtgttcagggacgatttc
tcccctcgcttcgtcgcactcttcaccctgctgctcttcctgaagtgcttccactggctg
gcggaggatagagtggactttatggagaggagtccaaacatatcgtgggttttccacttg
agagtattgtctctgctcgggctcctggctgtcatggacttcatgttcgttaaccacgcc
tgtcacagcatcatcaccagaggggcttcggtccagctcgtctttgggtttgagtacgcc
atcttgatgaccatggtcctgaccaccttcatcaagtacatcctgcatactgtggacctt
cagagtgagaacccctgggacaacaaggccgtctacatgctctacactgagctcttcaca
ggtttcatcaaggttctcctgtacatcgccttcatgacgattatgataaaggtgcacacc
ttccctctgttcgccatccgacccatgtacctggccatgaggcagtttaagaaagctgta
acggatgctatcatgtcgaggagagcgatccgcaacatgaacacgctatatcctgatgct
acccctgaggatctgcaggcctctgacaatgtttgcatcatctgcagagaggaaatggtc
accggagccaagaagctaccctgtaatcacatattccactcaagctgcctgcgctcctgg
ttccagcggcagcagacctgccccacctgccgcatggacgtcctcagagcatccaataac
aaccagactcaggctgcagccccggctccagccccggcccctgcagcacctgccaacgct
cctgctgctccggccgcaaatgctcctggcatgcttccagccttccctccaggaatcttc
cctttctggggtccttttcctgccgtccctcctcctgcagccggggctccgcctccagct
cctggtgcaactgaccctccacagagcaacgctgaggcagctcaggcagctggcaccagt
gagcctgcgtcagctgctgcagacggtgccacgtcatcaacagctgctccagggtctgca
attccaggattccctttctccttcccgcctccgcccttccctgccgctccatggctgccg
atgccaccgcctccaccctttgtgtcgtcgatgccgcccccgcctccgtcgctgtctcgc
ctgacggaagaggagctgagggagctggaagctgaggggcggcggggcctggaggcccga
ctgcagtgtctccagaacattcacactctgctggacgccgctatgctcaacatccaccac
taccttagcaccgtcgccacgctaacccctccgcggcctgagggcgacggcgctgcagga
gccggaggatccagtcaggaggcagctgccagcagcactcagagctcgaccacagagaag
gaatcctccacctcggatccagcgagtggagccgcggtctcctcccagcccgccgactcc
acctcctccacttcagagtcggaaagaaaggaaaactgggacgaagaactgatggaggac
gagaacggggagccgagcgccgctgagctgaggcgccgccgcctccgcaagctagagaca
gcgtcaccgtcttcctcatcgcccccccctcctccagataactag
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