Cyprinodon variegatus (sheepshead minnow): 107090207
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Entry
107090207 CDS
T06110
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107090207 (ctr9)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
107090207 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
107090207
NCBI-ProteinID:
XP_015238948
Ensembl:
ENSCVAG00000017846
UniProt:
A0A3Q2EC25
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYK
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKDSESIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLDR
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATAEISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQMLKEQEERQKREAEEQKKLLEQRALFVEKTKNLLTFVEGPKETAK
EKKKGGGGGGRRKKGDVDDFVNDDSDEDLPIKKKKRRKSSGSEQEDGDGGEKKKKKRRRP
AKGGDDSDEEGASRPKKQRKPKEGGKKKEKPQPERMPPSLKGKIKSKAIISSSESSSDED
GLKIAEDRNRDSGSGSEAEGDHRKRIASDSDSDGERNRSGSEAGSPRRSVGSDESGSDRP
VKKRRAQRQSDSEQSDNESKRSQSGSEDESRAPSDRGSEAGSDNEGSPRRSDNGSEQEGS
NNDDSD
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggttctattgagatccctttacgggacacggatgaggttatcgagctcgac
ttcgaccagttgccagagggagacgaggttatcagtatcttaaagcaggaacacacacag
ctgcacatttggatagctttggcgttggagtattacaagcaaggcaaaacagaagatttc
gtcaagcttttagaggctgcacgcatcgatggaaacctggactacagagaccatgagaag
gaccagatgacctgcttggacacattagcagcttactatgtccagcaggctcgtaaagag
aagaacaaagatgccaagaaggagctcatcacacaggccactctgctgtacaccatggca
gataagatcatcatgtacgatcagaaccatttgctgggacgagcctgtttctgcttgctg
gaaggagacaagatggaccaggctgatgctcagttccactttgtgctcaaccagtccacc
aataacatccctgctttgcttggtaaggcctgcatctcgttcaataagaaggactacaaa
ggagcgctggcgtactataaaaaggctttacgaacaaaccctggctgcccagctgaagta
cgattggggatgggtcactgtttcgtcaagctcaacaaactggagaaggcccgtttggcg
tttggtcgggccctggagctgaactctaagtgtgtcggagcgctggttggtttggcggtt
ctagagctcaacaacaaagattcagagtccattaagaacggagtgcagctcctgtcacgg
gcttacaccatagatcccagcaaccccatggtgctcaaccacctcgccaaccacttcttt
tttaaaaaggactacagtaaagtccaacatctcgccctccatgctttccacaacactgaa
gttgaggccatgcaggccgagagctgctatcagttagctcgttcatttcatgtgcaggag
gactatgaccaggcgtttcagtattactaccaggccactcagtttgcctcgtctaccttc
gtgctgcccttcttcggtttggggcagatgtatgtgtatcgtagggacaaggaaaatgct
gcacagtgcttcgaaaaggttttaaaggcgtacccaaacaactacgaaacaatgaaaatc
cttggatctctgtacgcaacttcggatgatcaggaaaaaagagacatcgcaaaaggccac
ttgaagaaggtgacagagcagtacccagatgatgtggaggcgtggatcgagctggctcag
atcttggagcagaccgacatccagggtgcgttgtcggcttatggcacggccacacgcatc
ctccaggagaaggtgcaggctgacgttcctcctgagatccttaacaatctgggagctctg
catttcagactaggaaaccttggagaagcaaagaaatattttcttgcatcactggaccgc
gccaaagcagagggagagcatgatgagcattactacaatgctatttctgtcactacatcc
tacaacctggcccgtttgtacgaggccatgtgtgaattccacgaagctgagaaactttat
aaaaacatcctcagggagcaccccaactatgttgactgttatttgcgtcttggtgcaatg
gctcgcgacaaaggaaacttctatgaagcatctgattggtttaaagaagccctgcagatt
aatcaggatcacccagacgcctggtcactcatcggaaatcttcacttagccaaacaggaa
tgggggccgggtcagaagaagtttgagcgcatcctcaaacagccgtccactcagaacgac
acatactccatgctggcactgggtaacgtgtggctgcagactctgcaccagccaaccaga
gacagagaaaaggaaaagagacaccaggatcgggccttggcaatatataaacaagtcctg
cgaaatgacgcgaaaaacctttatgctgctaatgggatcggggccgtgcttgctcataaa
ggttatttccgagaggcacgtgacgtgtttgctcaggtgagagaggctacagcagaaatc
agtgatgtctggctgaatctggctcatatttatgtggagcagaagcagtacatcagtgcc
gtgcaaatgtatgaaaactgcttgaagaaattttacaaataccaaaacacagaggtgttg
ctgtatcttgcaagagctctcttcaaatgtgggaaactccaggagtgcaaacagatgctg
ctgaaggctcggcatgtggcgcccagcgacacggttctaatgttcaacgtggctctggtg
cttcaaaggctcgccaccctcgtgctaaaagatgagaagagcaacttaaaggctgtgctc
agtgctgtgaaggagcttgaactggctcacagatacttcagctacctaagcaaagccgga
gacaagatgaggtttgatctcgcccttgcagcatctgaggccaggcagtgttctgacctg
ctgagtcaggctcagtaccatgtagccagagccaggaagcaggatgaagaggaaaaggag
ctccgggccaaacaggagcaagagagggacctccttcgccagcagatgttaaaagagcag
gaagaacggcagaaaagagaggcagaggagcaaaagaagctcctggagcagagagctttg
tttgtggagaagaccaagaacttgctcacgtttgtggaaggcccaaaagaaacggccaaa
gagaagaagaaaggaggtggtggtggcggccgccgcaagaaaggtgacgtggatgacttc
gttaatgacgattcagatgaggaccttcctataaagaagaagaagaggaggaagagcagc
ggcagtgaacaagaagatggtgatggaggggaaaagaagaaaaagaagaggaggagaccc
gcaaaaggaggagatgacagtgatgaagaaggagcctctcgacccaagaagcagcgtaaa
cccaaagaaggagggaagaagaaagaaaagccacagcctgagcgcatgcctccatctctc
aaagggaagatcaagtccaaggctatcatctcctcttctgaatcctcgtccgatgaggac
ggactgaaaatagctgaagaccgaaacagagacagtggctcaggatctgaggccgagggt
gatcaccggaaacgcatagcatccgacagcgactcggatggcgagaggaatcggtcgggt
agcgaggcaggcagccctcgacgttctgtcggttccgatgaatcgggcagtgaccgtcct
gtaaagaagaggagagcgcagcggcagtccgactctgagcagtcggacaacgagagcaag
aggagccagtcgggatcagaggacgagtccagagcgccttctgacagaggatctgaggct
ggatcagataacgaaggctccccacggcgctccgataacggttcagaacaggaggggtcc
aataacgatgatagtgattag
DBGET
integrated database retrieval system
