Cyprinodon variegatus (sheepshead minnow): 107090213
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Entry
107090213 CDS
T06110
Symbol
kars
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107090213 (kars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cvg01007
]
107090213 (kars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvg03016
]
107090213 (kars)
Enzymes [BR:
cvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
107090213 (kars)
Amino acid related enzymes [BR:
cvg01007
]
Aminoacyl-tRNA synthetase
Class II (A)
107090213 (kars)
Transfer RNA biogenesis [BR:
cvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107090213 (kars)
Prokaryotic type
Other AARSs
107090213 (kars)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
DUF6584
Motif
Other DBs
NCBI-GeneID:
107090213
NCBI-ProteinID:
XP_015238956
Ensembl:
ENSCVAG00000019686
UniProt:
A0A3Q2DCB8
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MLCLVVAARQQLCRAFAVRGQWLKHASPCTAAAPAQCHAIRWRGDKSELKRRMKAEKKAA
EKEAKAKESGEQTESNDHQAQHANALDDETLDPNQYFKIRSQAIQDLKGTAEDPYPHKYK
VDLSLTDFIEKYNYLQPGDQLSDVVLNVSGRIHAKRASGAKLLFYDLRGEGVKLQVMANS
RSYKSEEAFVAINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFGL
KDKETRFRQRYLDLILNDYVRQKFLTRAKIITYLRSFLDQMGFLEIETPMMNIIPGGAVA
RPFVTYHNELDMNLFMRIAPELYHKMLVVGGLDRVYEVGRQFRNEGIDLTHNPEFTTCEF
YMAYADYHDLMDITEKLLSGMVKHITGGYKVTYHPDGPEGRAYEIDFTPPFKRVSMTHDL
EKIMGVKFPPTDSYDSDETRKFFDDLCAQKGVECPPPRTTARLLDKLVGDFLEVECINPT
FICDHPQIMSPLAKWHRSEKGLTERFELFVMKKEICNAYTELNDPIRQRELFEQQAKAKA
EGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPDDNKK
AEGPQTST
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcttggtcgtggctgccaggcagcagctgtgtcgagcctttgctgtcagagga
cagtggttaaaacatgcatccccgtgtacagctgcagcaccagctcagtgtcatgctatc
cgatggagaggtgacaaaagtgagctgaagaggcgaatgaaagctgagaagaaagcagca
gagaaagaagcaaaagcaaaggagtcgggggaacaaactgaatcgaatgatcaccaagca
caacatgccaatgcgctggatgatgagacactcgatcccaatcaatacttcaagatccgc
agccaggctatccaagacttgaagggcacagctgaggatccgtacccacacaagtataaa
gtagacctgtcactcacagacttcattgagaaatacaactacctacaacctggtgaccag
ctgagcgacgtcgttctcaatgtgtcaggtcggattcatgccaagagggcatctggtgct
aagctgctcttctatgacttgcgtggtgaaggagtcaagctgcaagttatggcaaactca
cggagctacaagtctgaggaagcttttgtggccatcaacaacaagctgcgtcgtggtgac
atcatcggtgtccgtggaaatcctggcaagacaaagaagggagagctgagcatcattccc
attgagatgaccctgctgtcaccatgtttgcacatgttgcctcacctccactttggcctt
aaagacaaggaaaccagattccgccagcgctatttggacctgattctcaacgactacgtg
aggcagaagttcttaactcgagccaaaataatcacgtacctgcgaagctttctcgatcag
atgggcttcctggagattgagacgccaatgatgaacatcatccctggtggagcagtggcc
cgtccctttgttacctaccacaatgagctggatatgaacctcttcatgaggattgcccca
gagctttaccacaagatgcttgtggtcggtgggttggacagggtgtatgaggtcggtcgt
cagtttaggaacgaaggcatcgacctcactcataatccagaattcaccacctgtgaattc
tatatggcatatgcagattaccatgacttgatggacatcacagagaaactgctgtcggga
atggtgaagcacatcactggaggatacaaggtgacttaccatcctgacggtccagagggc
agagcctatgagattgacttcacacctccgttcaaaagagtgagcatgacgcacgacctg
gagaagatcatgggagttaaattcccgcctactgactcctacgactctgatgagacccgc
aaattctttgatgatctctgtgcccaaaaaggtgtagagtgtcctccacccaggaccact
gcccgcctcctcgacaagttggtgggagattttctggaggtcgaatgcatcaaccccact
ttcatctgtgatcatcctcaaatcatgagtcctttggcaaaatggcacagatcagaaaaa
ggtctaactgagcgttttgagctctttgtcatgaagaaggaaatctgcaacgcatacact
gaattgaatgatccaatcagacagagagagttgtttgagcagcaagccaaggcaaaagct
gagggtgacgatgaggccatgttcattgatgagacattctgcacagcactggaatacggt
ctgcctccaactgctggttgggggatgggaatcgaccgtctcactatgttcctcactgac
tccaacaacatcaaggaggtgttgttgttcccagccatgaagccagatgacaacaagaag
gctgaaggccctcaaacatctacctaa
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