Cyprinodon variegatus (sheepshead minnow): 107090306
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Entry
107090306 CDS
T06110
Symbol
slitrk1
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107090306 (slitrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
107090306
NCBI-ProteinID:
XP_015239104
Ensembl:
ENSCVAG00000014828
UniProt:
A0A3Q2D2B8
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MLLWIILLNAALCVASGNVTREVCKEKICSCSEVEGDLHVDCEKRGLNTLRHLTGPSSHF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLESNGLHDIVPGAFLGLQLVKRLHISNNKIRS
FKKSTFLGLDDLEYLQADFNLLRDIDPAVFRDLNKLEVLILNDNLISALPINVFQHVPIT
HLDLRGNRIKTLPYEGILEQIPGIAEVLLEDNPWDCNCELVSLKEWLENIPRNALIGRVV
CEAPTRLQGSDLNETSEADLCPSQSEGGDSSLPAPPTQEETSHPTPYKPPRNPGGGPPTP
GVNGSKSNSKSPESWQLKTKPTPVMAAADGNGDGGEEQLRNITCPQPCSCKLVGVRKGLA
VNCEGKKIESLASLKPKPLAAHELNMRDNNIHAVKKNQLLGYSSLNLLDLGGNNIKVVDN
GTFQNQSELRWLYMDKNYLDTLMAEMFVGLVNLEYLSLEYNDIQLIVAGAFSPMPNLRVL
FLNNNLLKALPVDAFVGISLSKISLHNNYFTYLPVTGVLEQLNSIIQIDLHGNPWDCSCN
IVPFKRWTEKLGADVIVSDLKCEAPEEFWKRDFRYVRNDLMCPKLFDRAVPTPVSKNGTY
AQDSGGTRSNSYLEPNRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRRDGNSS
ASEINSLQTVCDSSYWHSGPYHADGGAHRGFDCSTHLSAVDDA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtggatcatcctgctaaatgcggctctctgcgttgcaagcggaaatgtcacc
agggaggtttgcaaggagaagatctgctcctgcagtgaggtggagggcgacctgcatgtt
gactgcgagaagcgcggcttaaacacgctgcggcacctgaccggccccagctcccacttc
taccacctgctgctgcacggtaactcgttgtccaggctcttccccaacgagttcgccaac
ttctacaatgccgtgagcctgcacctggagagtaacggcctgcatgacattgtgccaggc
gcgtttctggggctgcagctggtcaagaggctgcacatcagcaacaacaaaatccgatca
ttcaagaaaagcacctttttgggcttggatgacttggaataccttcaggcggattttaat
ttgctaagggacattgatccagctgttttcagggacctgaataaactggaagttttgata
ctgaatgataacctcatcagcgcactacctataaacgtgttccagcacgtgcccataacg
catcttgatctgcggggtaatcggatcaaaacattgccttatgaggggattcttgagcaa
attcctggtattgcagaggtgctgcttgaggacaacccatgggactgtaactgtgagcta
gtgtccctgaaggagtggctggagaacataccacgcaatgccctcattgggagggtggtc
tgtgaggcccccaccaggctgcagggcagtgacctgaatgagacctcagaagcagatttg
tgcccatcacaaagtgagggtggagatagtagcctccctgcccctcccacacaggaggaa
acctcccaccccacaccttacaagccccccagaaatcctggtggagggccccctacaccc
ggagtcaatggttccaagagtaactccaagtccccagagagttggcagctgaaaacaaag
cccacaccggtaatggcagcagcagatgggaatggagacggcggagaagagcagctgcgc
aatatcacgtgcccacagccatgcagctgcaagctggtgggcgttagaaagggactggca
gtcaattgcgagggcaaaaagattgagagtctggcttccctcaagccaaagcctctggct
gcccacgagcttaacatgagagacaacaacattcatgcagttaagaagaaccagctcctc
ggctattccagcctcaatctgctggatctcggtgggaacaacatcaaggttgttgacaat
ggcacattccagaaccagagtgagctccggtggctgtacatggataagaactacctggat
acactaatggcagagatgtttgtgggccttgtaaatctggaataccttagtttggaatac
aacgatatccagctgatagtggcaggtgcattcagccccatgccgaacctgagagttctt
ttcctaaacaacaaccttcttaaggctctccctgtggatgcttttgttgggatttctttg
tcaaaaatcagtctacataataattactttacctatctccctgtgactggtgtcttggag
cagctcaactccatcatccagatagaccttcatgggaacccatgggattgctcatgcaac
attgtgcccttcaagcgttggaccgagaagcttggagccgacgtaattgtgagtgacctc
aagtgtgaagcaccagaggagttctggaaacgggacttccgttacgtgcgtaatgacctc
atgtgccccaagctgtttgatcgggccgtgcccacaccagtgtccaagaatgggacttat
gcccaggactcaggtggaacacgctcaaactcatatttagagcccaaccgggtctcaata
tcagtgcttgtgcctgggctgctgctcgtgtttgtcacatccgccttcacagttgtgggg
atgcttgtgttcatcctgcgcaaccggaaacggtcgaagcggcgagacggcaactcatcc
gcatcagagatcaactccttacagacggtgtgcgactcgtcctactggcacagtgggcca
tatcatgcagacggaggtgctcatcggggcttcgactgcagcacacacctctcagctgtg
gacgatgcataa
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