Cyprinodon variegatus (sheepshead minnow): 107090354
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Entry
107090354 CDS
T06110
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107090354 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107090354 (rnf43)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107090354 (rnf43)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107090354 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
PA
ECSCR
zf-C3HC4_3
zf-C3H2C3
zf_RING_Vps8_fungal
FANCL_C
Motif
Other DBs
NCBI-GeneID:
107090354
NCBI-ProteinID:
XP_015239169
Ensembl:
ENSCVAG00000014156
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MTVPLRPLAGLWPWLLMAALQVVLGQPSLESERSGLRAVIKVTLVKEPKGEPIVLKGEFV
GGSAGKAQGKLMQYHPLSLCNTSDDERQDSAFITIVKLEHRVPRCSLLPEKARIALEKGA
QAVIFDVSDDANAPSELKDTDSLPRPVVLIKGRDAEDLMNLVNKNEEATVNIETEVEPKW
PHYDVSILLTIVLVILTIVLIFAFRYKCRSNRTWDSVHQQTMRAISRLETRTYRSQSCSG
SQRPRGAWGSASSSNSSPVCAICLEEFQDGQNLRIISCHHEFHRDCVDPWLMQHRTCPLC
MHNIMGTERQAQRTRNQQSSEQSQSFLHSQPYSSPHNHPFPQHAIPFSMRPHYPRGPSGP
YPNLGHYSGSSPIDTQTLHFLSSRQLGGGCGYHLPVDVPVRPHRIGANCRTSSHHYPSRR
SCHNYRSSCLAQRNAAGSRQQHGVSVPPQSRGGAAHSRPDDGSCSGGSYHTERSGYLADG
PASDSSSGPWHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPLGYFGAGAGQVPRR
NSLEAGAQNRPKSLDSVVNKAGCPEEQPQTVFSHIHYHRHRHHHYEEGEHSQGVSRGSDE
EQGAAAAAAAAPPAPVQNKDSPKHSPCHCPKPEPTDRPSPGTERQDHNQTGPPVIVPSVP
LQLQSHCCHQGHGHHTAPLGRVGGCLLDGPSVHFHQSLDLQDDHSIHIHYGQSPGFCCSP
PELHPALLPVPLILDSAGIEEWPCCSGAHVVWQRQVQQAHSEPQLMGPGTSMDRPPCRVH
QGPSAERSTDVCLYCQSLQHNQGSEEESGV
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccctctgcggcccctggccgggctctggccgtggcttctcatggcggccctg
caggtggtgttgggccagccgagcctggagtccgagcgctcgggcctccgagcggtcatc
aaggtgaccctggtgaaggagcccaagggagagcccatcgttctgaaaggggagttcgtg
ggaggaagtgcaggaaaggcgcaaggaaaactcatgcagtatcaccctctgtctctctgc
aacacgagcgacgatgagcgacaagacagcgccttcatcaccatcgtcaaattggagcac
agagtcccccgctgctccctgctgccggagaaggctcgcatagcgctggaaaagggagcc
caggctgttatcttcgacgtcagcgatgacgccaatgcgccttctgagctgaaggataca
gactccctcccccgccccgtggtgctgattaagggaagggatgctgaggacctgatgaac
ctggtgaacaagaacgaggaagccacagttaacattgaaaccgaggtggagcccaaatgg
ccacattatgatgtgagcatcctgctcaccatcgtcctggttattctcaccatcgtcctc
atctttgctttccgctacaagtgcaggtccaacagaacctgggactccgtccatcagcag
accatgcgggccattagtcgactggagaccagaacctaccgctcccagagctgctcgggc
tcacagcgcccccgtggggcctggggttcagccagcagttctaactccagccctgtctgc
gctatctgcctggaggagttccaggatggccagaacctgaggatcatctcctgccatcac
gagttccacagagactgtgtggacccctggctgatgcagcaccgcacctgtccactgtgc
atgcacaacatcatgggtacagagaggcaggctcagaggaccagaaaccagcagagttca
gagcaaagccagagcttcctgcattctcagccttacagtagcccccacaaccatcccttt
ccccagcacgccatccccttctctatgagaccccactacccccgtgggccgtcgggaccc
tatcccaacctgggccactacagcggctcttctcccattgacactcagactctacatttc
ctcagcagtcggcagctgggtggtggctgtggataccaccttcctgtggatgttcctgta
aggcctcacaggatcggagccaactgcaggacctcctcccatcactatccctctcgtcgg
tcctgccacaactaccgctcctcctgtctggcccagcgaaacgccgccggctctaggcag
cagcacggcgtctcggtcccgccgcagagccggggaggagcggcccacagccgaccggac
gacgggagctgctctggaggcagctaccacacagagcgcagcgggtacttggcggatggg
ccagcgagtgactccagttcggggccctggcatggctcctccagtgactcagttctcaac
tgtacggacgtgtccctgcagggagtttatggcagctggtccactttccgcagctctctg
agcagtgactatgacccattagggtattttggggcgggggcagggcaggtcccccgcaga
aatagtctggaggccggggcacagaatcggcccaagtctctggattctgttgtgaataaa
gcaggctgtccggaggaacaacctcagactgttttcagccacattcactaccaccgccac
agacaccaccactatgaggagggggagcacagccagggggtgagcagaggctcagatgag
gagcagggggctgctgcagctgctgcagctgctccccctgctcctgtgcagaataaagac
tccccaaaacacagcccctgccactgccccaaaccagagcccactgaccggcccagcccg
gggacagagcgacaggaccacaaccaaaccggacctcctgtcatagtcccctcagtcccg
ctacagctccaatcccactgctgccaccagggacacggacaccacaccgctcctctgggc
cgagtgggaggctgtctgctcgacggaccctcagttcactttcaccagagtctggacctg
caggacgaccacagcatccacatccactacggtcagagcccgggcttctgctgctctccc
cccgagctgcacccggcgttactccctgtgcctctcatcttggactcggcaggaatagag
gagtggccttgctgctcgggggcccatgtggtgtggcagagacaggtccagcaggctcac
tcagagcctcagctcatgggaccaggaacctcaatggacaggcccccctgcagggtccat
cagggaccctctgctgagcgcagcacagatgtttgtttatactgccaatcactacagcac
aatcagggatcagaagaggagtctggggtgtga
DBGET
integrated database retrieval system
