Cyprinodon variegatus (sheepshead minnow): 107090448
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Entry
107090448 CDS
T06110
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
107090448 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cvg04050
]
107090448 (edar)
Cytokine receptors [BR:
cvg04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
107090448 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
107090448
NCBI-ProteinID:
XP_015239316
Ensembl:
ENSCVAG00000010131
UniProt:
A0A3Q2GGK2
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MSQSGGQTKFIFLSLILVSHLFVSAEYFNCGEYEFFNQTSNSCQACPQCQPGQEPHMTCG
YGVKDEDFSCVPCPQGKYSKGKYEICRRHKDCDALYRAIVRVPGTAESDAECGQCLPGYY
MLENKPRNAYGMVCHSCQNAPSNTKECMQTDEPKSNPLIDSKSTTVFPHQKKEIPGQGHL
ATALIIAMSTIFIMAIAIVLIIMFYILKAKPGGQACCSGKVVKAVEAQTIKQEDKKDVPD
NVVIFSEKDEYDKLKAAPQKTVKSENDASSENEQLLSRSIDSDEEASDKQGSVESTSPNP
SCCLVDLGNKSDLSLLSLGLLDRGRTSNGAPVVAASHAINIQSPSHINSVNHVASSNHIS
SMNGINNNKTPGMLQSRRKKILELYARACHVTEGLSPTELPFDCLEKASRMLSSSYSSEA
AVVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESLC
VDVLGTSEVVAVAGRQSINSFHSQLVCSSQCMSPSQRCASV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagagcggaggtcagacgaagttcatcttcctgtccttgatattggtgtctcat
ctgtttgttagtgccgagtacttcaactgtggagagtacgagtttttcaaccagaccagc
aacagctgccaggcctgtcctcagtgccagccagggcaagaaccccatatgacatgcggt
tatggtgtaaaggatgaagacttttcctgcgtgccctgcccacaggggaaatactccaaa
ggaaagtatgagatctgcaggcgccacaaggactgtgatgctctttatagagccattgtc
cgtgtaccaggaactgctgaaagtgacgctgagtgtggacaatgtttaccagggtattat
atgttggagaacaaacctaggaacgcttatgggatggtttgccactcctgccagaatgca
ccgagcaacacaaaagaatgtatgcaaaccgacgaaccaaaatcaaatccactgattgat
tccaaaagcaccactgtcttcccccatcaaaaaaaagaaatacctggacaaggacatcta
gccacagcactcattatcgccatgtcaaccattttcatcatggccatcgccatagttctt
ataataatgttttatatcctgaaggcaaagccgggtggccaagcatgttgttctggcaaa
gttgtgaaagccgtggaggcccaaaccatcaaacaggaagacaagaaagatgtccctgac
aatgtggtgatcttctcggagaaggacgagtatgacaaactgaaagcggctcctcagaag
acagtgaaaagtgagaatgatgcatcgtcagagaatgagcagctgttgagtcgcagcatc
gacagcgacgaggaagcatcagacaagcaaggatcggtcgagagcacgtcccccaacccc
agctgttgcctggtggacctgggcaacaaatctgacctctccctgctctctctgggactc
ctggaccgtggccgcacatccaatggtgccccggtggtcgcagccagccacgccatcaac
atccagagtcccagccacatcaacagtgttaaccacgttgcttccagcaaccacatcagc
agcatgaacgggatcaacaataataaaaccccagggatgctacagagtcgaagaaaaaag
atactagagttgtatgctagagcctgccatgtgactgagggactgagccctacagagctt
ccttttgactgcctagagaaggccagtcgcatgctgagctcctcctacagcagtgaggcg
gccgtggtgaagacatggaggcacctggcagagagttttggcctgaagcgtgatgagatc
ggcggcatgagtgatggcctacagctttttgaaagagtgagcacggcgggctacagtatc
cctgacctcctcactcggctggtgcagatcgagaggctggacgctgtggagtcgctctgc
gtggacgtgcttggaaccagcgaggtggtggcagtcgctggccgacaaagtatcaacagc
ttccacagccagttggtgtgttcttcccagtgcatgtctccctcccagcgctgtgccagt
gtctaa
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