Cyprinodon variegatus (sheepshead minnow): 107090465
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Entry
107090465 CDS
T06110
Symbol
prom1
Name
(RefSeq) prominin-1 isoform X1
KO
K06532
prominin 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107090465 (prom1)
04090 CD molecules [BR:
cvg04090
]
107090465 (prom1)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
107090465 (prom1)
CD molecules [BR:
cvg04090
]
Proteins
107090465 (prom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prominin
Tweety
Baculo_PEP_C
Spidroin_N
LRR_TTSS
Claudin_2
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
107090465
NCBI-ProteinID:
XP_015239338
Ensembl:
ENSCVAG00000009464
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MFWTQWLVLLLWWGATCAEQHAEERDGQRDGVRSDPRRQRSPPPVEPLDFGFVPAAVYDT
HAYYEPGTIGILFHMVHAFLYVVQPNSFPKDLIVRIIQQNMGGIKIEEWRKPDNVVLLLQ
WIHYESGFLICTVFGIVFVILTPIVATCFCMCRCCDNCGGEMHQRQRKNADCHRGFFTAS
LIATTIFIILGVLVAYAANHNISSQIKSTRRLINTNMRDLKTFANNTPAQIDYLTAQYTT
AKNKVLSDLDNIGPLLGARIHSHLEKEVVPALDAALRMAGAKVESAIKAMRETKEALENV
SSALEILQEGMGKLQASLTGERSSLSNTLSDPACTNGAASPTCNSIRSALPQLGVNAEFS
RLPDVNDALANINTVLKVDLSNIVQKGYASFNDTPALVKEQTKNIVTALPRVKNMLDKIG
NEITAFSKMFPVESSLANFTIFLNERHKYLESFYPQIDQMDFYRWIICVAVLCTVVLILA
FNVLGLLCGTCGYDKQATPTTRGCLSNTGGNLLMAGVGFSFIFAWGLMGIVTTMFVVGGN
VEKLICEPLANRQLFKIIDTPFLVHPEKRNFLPGMLFQNPNIDLTLGSMYRECYENNGLY
HALQLENIFNINTFLNRTVYNRDLAKVFDGVQVDLKDIMLLDQASRDNLINFANSGLGDI
DYPAYLAEVNKGVTLVDLLSFCSDLEDQADQLPRGALENALKGHASSIRTIHREQVVPLE
QAMSTLSQSIKLLQRTSNDLPMKVTNILSAIDAAEYLITHNASHVVKQETKAFVQSLVSY
FKQYTEWVKNSLTAEVAQCKPISNMVDSMEIVACSFIIDSVNTFWMGLGACCILLIPSII
FSIKLAKYYRRMDTEDVFEDRAKTHNHDKQVCDHRGNVAPLSSPYNETLTWFPRASAPPS
EW
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgttctggacacagtggctcgtcctgctgctttggtggggggctacctgtgcggagcag
catgccgaggaaagggacggccaacgggatggggtcaggtcggacccccgcaggcagcgg
tcccctccgccggtggaaccgctggactttgggtttgttcccgcagcggtttatgacacc
cacgcatactacgagccggggaccataggaatcctttttcacatggtccacgcgtttctt
tatgtggttcaaccaaactctttccctaaagatcttattgttagaatcatacagcaaaac
atgggaggaattaaaatagaagaatggagaaagccagacaacgttgtcctgctgctacag
tggatccactatgagtctggattcttaatatgcacggtctttgggatcgtgtttgtgatc
ctcacccccatcgttgccacctgtttctgcatgtgtcgatgctgtgacaactgtggaggt
gagatgcatcagaggcagaggaaaaacgccgactgccaccgagggttcttcaccgcctcg
ctcattgctaccaccatcttcataattctgggagtacttgtcgcctatgcagccaaccac
aacatcagctctcagatcaaaagcactcgaagactcataaacaccaacatgagagacctg
aagacattcgctaacaacaccccagcgcaaatcgattacctgactgcccagtacaccact
gcaaagaataaagtcctgtcagacctcgacaacattggccctttgctgggagccagaatc
cacagtcatctagagaaagaggtggttcctgcgctggatgctgcccttcggatggcagga
gcgaaagttgagagtgctattaaagctatgcgggagaccaaggaggccctggaaaacgtc
agctctgcattggagatccttcaggaaggaatgggaaagcttcaggccagtttgacaggg
gagcgctcctctctgtccaacaccctgtctgaccctgcctgcacaaacggagccgcgtct
cccacctgcaattcaatccggtctgcgctgcctcagctgggagtcaatgctgaattctcc
aggctcccagatgttaatgatgccttggctaacattaacacggtactgaaggtagatctc
agcaacattgtccaaaagggttatgcctcctttaatgacacaccagcgttggtaaaagag
caaaccaaaaacatagtcacagctctgcctcgagtgaaaaacatgctggataagattgga
aatgagatcaccgcattctctaagatgttcccagtggaatcctctctggctaatttcacc
atatttctcaatgaaagacacaagtatctcgagtcgttttatcctcagattgaccaaatg
gatttctacaggtggatcatctgcgttgctgtgctctgcacagtcgtccttattttggcc
tttaatgtgcttggtctgctctgtggcacctgtggctacgataagcaggctaccccgaca
acacgtggctgcctgtcgaacaccggaggaaacctgctgatggctggcgtgggcttctca
tttatctttgcctggggactgatgggcatcgttacaaccatgtttgttgttggaggcaac
gtggagaagctgatatgtgaacctctggctaaccgacagctgttcaagatcatagataca
ccttttctggttcatcctgaaaaaaggaatttccttcctgggatgctcttccagaatcca
aacatcgacctgaccctgggcagcatgtacagggagtgctatgagaacaatgggctgtat
cacgctctgcagctggagaatatcttcaacatcaacaccttcctcaacaggacagtgtac
aacagagatctggctaaagtgtttgatggagttcaagtggacctgaaggacatcatgcta
ctggaccaggccagcagagataacctcatcaactttgcaaactcaggactcggagatatc
gactatccagcttacctggctgaggtgaataagggggtcactcttgttgacctgctgtct
ttctgctctgacctggaggaccaggccgaccagctgccacgtggagctttggagaacgca
ttgaagggacacgctagcagcatcagaacgatccacagggagcaggtggttcccctggag
caagcaatgagcaccctcagccagagcatcaaactgctgcagaggacatccaacgacctg
cctatgaaagtcacaaacattctgagtgccattgatgcagcggagtacctcataactcac
aatgcttcacatgttgttaaacaggagaccaaggcctttgtgcagagccttgtgagttac
ttcaagcagtacactgaatgggttaaaaactcgctaacagcagaggtagcccagtgtaaa
cccatcagcaacatggtggacagcatggagatcgtggcatgcagcttcatcatcgactca
gtgaacacattttggatgggtttgggagcctgctgcatccttctgattcccagcattatc
ttttccatcaaactggccaaatactacagacggatggacacagaggacgtctttgaagat
agggctaaaacacataatcacgataaacaggtgtgtgatcacagaggaaacgtcgccccg
ctcagctctccctataatgaaacattgacttggttccctcgggcctcagctccaccaagt
gaatggtga
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