Cyprinodon variegatus (sheepshead minnow): 107090477
Help
Entry
107090477 CDS
T06110
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107090477 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107090477 (sart1)
04121 Ubiquitin system [BR:
cvg04121
]
107090477 (sart1)
Spliceosome [BR:
cvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
107090477 (sart1)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107090477 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
107090477
NCBI-ProteinID:
XP_015239368
Ensembl:
ENSCVAG00000009800
UniProt:
A0A3Q2CR98
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MGSSKKHKEKSREKDAEERRREHKKHRHRDRDTSDRDKDRRKRSRSRERSRRESHSKAER
STGEPRVKREKVDAGYEESNTDIQPQSASGDASLSIEETNKLRAKLGLKPLELNEGKKEL
GTKEEPMVAETINPVLIRQQKEMREKLAAMKEKRLLNQKLGKVKAIGDDDWLDDTAAWVE
KSRKMAKEKEMAEKRAKLLEEMDEEFGVSSLVEEEFIQSKRDSYSSQDLKGLKVQHKVDS
FAEGQTVILTLQDKGVLEEEEDVLVNVGIVDKEKAEKNVELKKKKPDYKPYEEEESVDDM
VSFKPQTVLSKYDEEIEGEKKKSFRLGAWGFADGERERELQAMKESLRNQAQSLEMPALT
IASEYYSPQEMVGFKKTKRRVKKIRKKEKLTIADELPDDTRTTDFGSRVRGRGHKQVEEE
EEEPKKEGKAKDVNKLPHETPQMSDDIRMAEMDISDEDDYVPPEPTVIEEDEAEQELQKQ
LEKQRKLRQKQLLKDSGEKVAEKLKVLAKANDDNDPDKKNNIVFNATSEFCRTLGDIPTY
GLSGNREDQEDIIDFEQEEEKDDGGGSDSEMDENIGWSTVNLDEEQQQADLCTASATILD
EEPIVNSGLAAALKLCTNKGLLDTQMQKVARVKAPKAALPNDNYCIEDKMGFDDKYSRRE
EYRGFTQDFKEKDGYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTEKRMKK
LEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNVNNITK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttcaaaaaagcacaaggaaaagagccgcgagaaagacgcggaggagcgccgc
cgtgaacataagaaacatcgtcacagagacagagatacttcagatcgggataaagacaga
cggaaacgctccagatcaagagaaagaagcagacgagagagtcacagtaaagctgaaaga
agcaccggagaacctcgggtaaagagggagaaggttgatgctggatatgaggagagcaac
acggatatacagcctcagagcgccagcggagatgcctctctcagcatcgaggagacgaac
aaactccgcgcaaagttgggcctgaagcccctggagctgaatgaaggcaagaaggagctg
gggaccaaagaagagcccatggtagctgagaccatcaaccctgttctgatccgacagcag
aaggagatgagggaaaagctcgctgctatgaaagaaaaacgcctgcttaaccaaaagctg
ggtaaagtcaaagcgatcggtgacgatgattggctggatgacaccgcagcttgggttgaa
aaaagtagaaagatggccaaagagaaggagatggcagaaaagagagccaaactcctcgaa
gaaatggatgaagagtttggagttagcagcttagtggaggaggagttcattcaaagcaaa
cgagactcttattcctcacaggatctgaaaggtctcaaagtgcaacacaaggtggactcc
tttgctgagggccaaactgttatccttactctacaagacaaaggcgtgctggaagaggag
gaagatgtgctcgtaaacgttggaatcgtggacaaggagaaagctgagaagaatgtggag
ttaaaaaagaagaagcccgactacaagccctatgaagaggaggagagtgtggacgatatg
gtttccttcaagccccaaacggtgctctcaaagtatgatgaagaaatcgaaggggagaag
aaaaagagcttccggttgggtgcgtggggctttgcagatggggagcgagaacgtgagctc
caggcaatgaaagaatcactgcgaaatcaggcccagtcgctggagatgcctgctctcacc
attgcctctgaatactactctcctcaagagatggttggcttcaaaaagacgaagcgcaga
gtcaagaaaatccgtaagaaggagaagctcactattgcagacgaacttccggatgacacc
cgcaccaccgattttggctcaagggtacgaggaagaggccacaaacaggtggaggaggag
gaggaggaaccaaagaaagaaggaaaagctaaagatgtcaacaagctgccacatgaaact
ccccaaatgtcagatgatatcaggatggcagagatggatataagcgacgaggatgattat
gttcctcctgagccgactgtgattgaggaggatgaggcagagcaggagctacaaaaacag
ctggagaagcagaggaagctgaggcagaaacagctcctcaaagactctggcgagaaggtg
gcagagaaacttaaagtgcttgccaaagcgaatgatgacaatgaccctgacaagaaaaac
aacattgtcttcaatgccacctcagagttctgcagaactctgggagatattccaacttat
ggactctctggcaacagagaggaccaggaggatattattgattttgagcaagaagaagag
aaagatgacggtgggggttcagactctgaaatggatgagaatattgggtggagcacagtt
aacctggatgaagagcaacaacaggccgatctctgcacagcctctgccaccattctggac
gaggagcccatcgtcaactccggccttgcagctgcactgaagctgtgtacaaacaaaggc
ctgttggacactcagatgcagaaggtggctcgtgtcaaagcaccgaaagcggccctgccc
aatgataattactgcatcgaagacaaaatgggctttgatgacaagtacagtcgcagagag
gaatacagagggttcacgcaggatttcaaggagaaagatggctataagcctgacgtcaag
atcgagtatgtggacgagtccgggcggaaactcactccaaaagaagctttcaggcagctt
tcacacagattccacgggaaaggttccggaaagatgaaaacagagaagaggatgaaaaag
ctagaggaagaggcgctgctaaagaagatgagcagcagcgatactcctctcgggacggtg
gctttgcttcaagagaaacagaaatctcagaaaacgccatacattgtgcttagtgggagt
gggaagagcatgaatgtaaacaacatcacaaaataa
DBGET
integrated database retrieval system
