Cyprinodon variegatus (sheepshead minnow): 107090498
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Entry
107090498 CDS
T06110
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvg03016
]
107090498 (cdkal1)
Enzymes [BR:
cvg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
107090498 (cdkal1)
Transfer RNA biogenesis [BR:
cvg03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
107090498 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
Motif
Other DBs
NCBI-GeneID:
107090498
NCBI-ProteinID:
XP_015239395
Ensembl:
ENSCVAG00000008636
UniProt:
A0A3Q2CNL6
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MPSACDSLIEDIEDMVSLNDPTPHDRQSARKSIIPRSRKKKELLSSEELQADSFIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPADADLWLLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMEYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVQEIPDGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFRRVVDFLKDRVPGVTIATDIICG
FPGETDEDFQDTLDLVKHYQFPSLFINQFYPRPGTPAAKMDQVPAHVKKQRTKKLSELFH
SYNPYDHKVGERQFVLVTEESFDTQFFVSHNKFYEQVLVPKKAEFKGKMIEVDIYEAGKH
FMKGRPVEDSKPFTPSIAAPLRKGEVSGLMQVHKVNGVKGATSGTPDSALHVGSYSLDRE
LLKKLGMGFALAAAILAFIVEKLF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgcctgtgactctctgatcgaagacattgaggacatggtgtctcttaatgac
cccactcctcatgacagacagtctgcaaggaagagtattataccaaggtccagaaagaag
aaggagcttctgagctccgaagagcttcaagcagacagttttatccctggtacccagaag
atctggatgaaaacgtggggctgcagtcataacaactcagatggagagtacatggccggg
cagctggctgccagcggatataagatgaccgatgacccggcagatgcagacctgtggttg
ctcaacagctgcaccgtgaaaaaccctgcagaggaccacttcagaaactccatcaagaaa
gctcaggagcagcagaagaaggtggtcgttgcaggttgtgtaccccaagcccagccacgg
atggaatacctgaaaggcctcagcattataggggtccaacagattgatcgagtggtggaa
gtggtggacgaggctgttaaaggtcactctgttcgcctgttgggccagaagaaagacgga
ggaaaaagacttggaggtgcaaggctggacctgccaaagatcagaaagaaccctctgatt
gaaataatctccattaacactgggtgtctgaatgcatgtacttactgcaagacgaaacat
gctcgaggagacttggccagttatcccatagaggaactggtggaaagagccaggcagtcc
ttccaggagggagtatgtgagatctggttgacgagtgaagacacaggtgcttacggcaga
gacatagggacagatctgcctacattactgtggaggctggtgcaggagattcctgatgga
gccatgctgaggctgggcatgaccaacccaccttatatcctggaacatctggaggagatg
gcgaagattttgaatcatccgcgtgtttatgccttcctccatgttcccgtgcagtcagcc
tcagacagtgtcctgatggacatgaagagagaatactgcattgatgacttcagaagagtt
gttgacttcctcaaagacagagtacctggggtaacgattgcgacggatataatctgtgga
tttcccggtgagactgatgaggacttccaggacaccttggatcttgtgaaacactaccag
tttcccagtctgttcattaaccagttctacccgagacccggtacacctgctgctaagatg
gaccaagtcccagcacatgtgaagaagcaaaggactaaaaagctttctgaactcttccac
tcttacaacccctacgaccacaaggttggagaaaggcaatttgtgctggtgacggaggag
tcttttgatacccagttctttgtttcccacaacaagttctacgaacaggtgctggtgcct
aaaaaggctgaattcaaagggaagatgatagaagtagacatctacgaggcaggaaaacac
tttatgaaggggaggccagtggaagacagcaaaccattcactccctccattgctgcacct
cttcggaaaggagaagtatctggtttgatgcaggtacataaagttaatggagtcaaagga
gcaacttcaggaacacccgactctgcgctccatgtcggctcctacagtctggacagagaa
ctgctgaagaaactggggatgggctttgcactagcagccgccatcttggcctttattgta
gagaagctgttttga
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