Cyprinodon variegatus (sheepshead minnow): 107090531
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Entry
107090531 CDS
T06110
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107090531 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107090531 (nup50)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107090531 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
107090531
NCBI-ProteinID:
XP_015239438
Ensembl:
ENSCVAG00000008465
UniProt:
A0A3Q2CND8
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MAKRIADKELTDRNWDQEEEGEEAGTFSLASEDVLKSRAIKKAKRRNTGGESEGGGAFKG
FKGFSMATPSTTPTAFSGFGNAGGFKGFGGLSNGNSTTPSFGGFSSPPKSAAAIGVTFNG
PSSSQPAADISTQQTNGSAPSPTQSSGNKEYSRQLTALNCSVRDWITKHVNSNPLCDLNP
IFRDYERHLASIERQYGAGSADGGLEKKQGSTPPPPSSSSSGSAAPSAALFSFSKTTTED
PAQKSSSSAPIPAGVTFNFGEKVDGSVLGSLASKTSIPSFSFSSSSSSQTSLFGASGPAA
PLPFGGNKTQNAAEDNAEEESEEPPKPEVKEVKEDDAFYSKKCKLFYKKESEFKEKGVGT
LHLKHTAEGKTQMIVRADTNLGNILLNIIVPPAMPCSRVGKNNVMVVCVPNPPFDDKNPS
TPVPLLIRVKTSEDADELHKTLEEKKG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggatcgctgacaaagagctgacagacaggaactgggatcaggaggaagag
ggagaggaggcggggactttttcacttgcaagtgaggatgtgttgaagagtcgagcgata
aagaaggcaaaacgcagaaacacaggaggagagagcgaagggggaggagctttcaaaggg
ttcaaaggcttctctatggctacgccttctacgactcctactgccttctctgggtttgga
aacgctggaggctttaaaggctttggaggtctgagcaacgggaacagcaccactccttca
tttggaggtttctcttctccacccaagtctgctgctgccatcggtgtaacgttcaacggg
ccgtcctcctcccagcctgctgctgacatcagcacccagcagaccaacggctctgccccc
agcccgactcagagctccggtaacaaggagtacagccggcagctcacagcgctcaactgc
tctgtgcgcgactggatcaccaagcatgtgaacagcaaccctctgtgcgaccttaacccc
atcttcagggattacgagcggcacctcgccagcatcgagcggcagtatggagcgggctct
gccgacggcggcttggaaaagaagcagggatctacccctcctcctccttcctcctccagc
agcggctcagcagctccgtcagctgctttgttctccttcagcaaaaccacgacagaggat
ccagctcagaaaagctccagctctgctcccatccctgccggggtcactttcaacttcggt
gagaaggtggacggctccgtcctgggatcgctggcgtctaaaacatctatccccagcttc
tccttctcctcctcctcgtccagtcagacctccctgtttggagcttcaggacctgctgct
ccgctgcccttcggtgggaataaaacccaaaacgctgcagaagacaatgcagaggaagag
tcggaggagcccccaaaaccagaggtgaaggaggtgaaagaggacgacgctttctattca
aagaagtgtaaattattctacaagaaggagtcggagttcaaagagaaaggagtgggaacg
ctccacctcaaacacaccgctgaggggaagactcagatgatcgtcagagccgacaccaat
ctgggaaacatcctgctgaacatcatcgtcccgcctgctatgccctgctcacgggttggg
aagaacaacgtgatggtggtctgcgtcccgaacccgccgtttgacgacaagaacccgagc
acccccgtccccctcctgatcagagtgaaaacctccgaggatgcagacgagctccataag
accctggaggagaagaaaggctga
DBGET
integrated database retrieval system
