Cyprinodon variegatus (sheepshead minnow): 107090565
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Entry
107090565 CDS
T06110
Symbol
ddx11
Name
(RefSeq) probable ATP-dependent RNA helicase DDX11
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107090565 (ddx11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107090565 (ddx11)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107090565 (ddx11)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
107090565 (ddx11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
DUF4045
AAA_22
Motif
Other DBs
NCBI-GeneID:
107090565
NCBI-ProteinID:
XP_015239502
Ensembl:
ENSCVAG00000004796
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MEIGRDSFPFPYKPYGIQEQFMRALYSALDEGKVGIFESPTGTGKSLSLICGALSWLTDY
EEKRKQETAALLQEGEASLSISVAPSSSTSSASAEPDWITDFVQKKAERDLVSKLKEEEL
KRKKREERLEIIRNNVHLKYAGKRKSREEDEAFKLLQLSKEEQAETPGDQEDEEFIVAEY
ESDDESKGKSRVFGGEEEEDEELVEEHVTKIYYCSRTHSQLAQFVHEVQKSPFSKNISLV
TLGSRQNLCVNKEVRRLGSVQRINDRCLEMQKNKHGEKIDSFLRSRPHSLSSWFSLFFSF
FNLFAERVQHEDGAKRKKGPPKSVCPYNKASALQQMRDEVLGTIQDIEQLLKIGKELHAC
PYYSTRLAVPPAQLVVLPYQMVLHEATRRAAGVQLKGQVVIIDEAHNLSDTLSCIHSAEL
NGAQLCRAQSQLTQYAERYKSRLKAKNVMYIKQILFVIEGLIRVLGGKVGQNPQSQITQA
GTEMYTINNFLFKAQIDNINLFKLHRYIEKSMISRKLGGFVEKYAGSGVMLHAQSTSNKE
NRRTEGLNRYLETLKKNPTSAPVPPTDQQGAAEADKVLSASPMMQVEGFFLALTNSNTDG
RVVLNKQGTLSESSVKFLLLNPAVHFAQVLKECRAVIIAGGTMQPVSDFKQELLLSAGVK
EERITEFSCGHVIPPENILPLVLCAGPSGQELDFTYQNRDSPRMMDETGRILSNICNVVP
GGVVCFFPSYEYSRRIISHWEASSLITRLGNKKKIFQEPKKANQVEQVLNEFTRCIQRCA
LDSSGGVTGAILFSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMSYLDKHL
PHSHGRSPGQALVENLCMKAVNQSIGRAIRHRGDYSSIVLCDRRYARPATLSKLPTWIKD
RTTTHSSFGPAFAALRKFFLEKKKTQE
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggaaattggaagagactcgttcccctttccctacaagccctacggcatccaggagcag
ttcatgagagctctctacagcgccctggatgagggcaaagtgggcatctttgagagtccc
actggaacgggcaagtctttaagtctgatatgtggagccctgagctggctgacagactat
gaggagaagaggaaacaggagacagctgctctgctgcaggaaggagaagcctctctctcc
atctctgttgctccatcatccagcaccagctcagcatcagcagaaccagactggatcacc
gactttgtccagaaaaaggctgaacgtgacctggtgtcaaagttaaaggaggaggagcta
aagagaaagaaaagagaagaacgactggaaattatcaggaataacgttcatctaaagtat
gctggtaaaagaaagagccgcgaggaggacgaagcgttcaagctgcttcagctcagtaaa
gaggaacaagccgagactccaggagatcaagaggatgaggagtttattgttgcagaatat
gagagtgacgatgagtcaaagggtaagagcagagtatttggaggtgaggaggaggaagat
gaggagctggtagaggaacatgtgaccaagatttactactgcagtcgcacgcattcccag
ttggcccagtttgtccatgaggttcagaagagcccctttagtaaaaacatcagtctagtg
acactgggttctcgacagaacctgtgtgttaacaaggaggtgcgacggctgggcagcgtc
cagcgaattaatgatcgctgcttggaaatgcagaaaaacaagcacggtgagaaaattgac
tccttccttcgatcaagaccacattctttgagctcatggttttccctttttttctcgttc
tttaatttgttcgcagagagggtacaacatgaagacggcgcaaaacgcaagaaaggccca
ccgaagagcgtttgtccttacaacaaagcttcggcgctgcagcagatgagggacgaggtc
ctggggacgatccaggacatagagcaactgctgaagatcgggaaggaattacacgcctgt
ccttattactccacacgtcttgctgtcccacctgcacagttggtcgttttgccttatcag
atggttcttcatgaggctacaagaagggcagcaggggtccagctgaagggacaggtggtg
atcatagatgaagcgcacaatctcagcgacaccctgtcctgtatacacagtgcagagctc
aatggagcgcagctttgccgcgctcagtcccagcttacccagtatgccgagcgctacaag
agcagactgaaggcaaagaatgtgatgtacatcaagcagattctgtttgtgatagagggg
ctgatccgtgtgctgggaggtaaagttggacagaatccacagagtcagattacacaagca
gggacagagatgtataccattaacaatttcctcttcaaggcccagattgacaatatcaat
ttatttaagttacacagatacattgaaaagagcatgatcagcaggaagctgggggggttt
gtggagaagtacgccggctctggtgtgatgctgcatgcccagagcacctccaacaaggag
aaccgtcgcacagaaggtttaaatcgttaccttgaaaccttaaagaagaaccccacctct
gcaccagttcctccaacagaccagcagggggctgctgaagcagacaaagtgctgtcagca
tcccctatgatgcaggtggaggggttcttcctggctctcaccaacagtaacactgatggc
agggtggttttaaacaaacaaggtactttgtcagagagcagcgtcaaattccttcttttg
aatccagccgtccactttgcccaggtgttgaaggaatgcagagcagtcattattgcagga
ggaacaatgcagccggtttcagacttcaaacaggaactactgctttctgctggagtgaag
gaggagcgtatcactgagttttcctgtggacatgtgattccccctgagaatattcttccc
ctcgttttgtgtgccggtccatcgggtcaggagctggatttcacctatcaaaacagagac
tctcctcgaatgatggatgaaacaggacgcattctctccaacatctgcaacgtggtccct
gggggggttgtgtgtttctttccctcttatgaatactccaggaggattatttctcactgg
gaggccagcagcttgattaccagactagggaataagaaaaagatctttcaggaaccaaag
aaggccaaccaggtggagcaggtgctaaatgagtttacccgttgtatccagcggtgtgcc
ttggacagcagtggaggagtcacaggggcaatattgttctctgtggtgggtggaaagatg
agtgaaggcatcaatttctctgatgacctggggaggtgtgtagtgatggtagggatgcca
tatcctaacatcaaatctccagagctgcaggaaaagatgtcatatcttgacaaacacctg
cctcacagtcatgggagaagccctgggcaagcactggtagagaacctgtgcatgaaggcc
gtcaaccagtctataggcagagccatcagacacagaggcgactattcctccatcgtcctt
tgcgacaggcgttacgctcggcccgccacgctgtctaagctccccacttggataaaggat
cgcaccaccacacactccagcttcggtcctgcttttgccgccttgcggaagttcttcctg
gagaagaagaagacgcaggagtag
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integrated database retrieval system
