Cyprinodon variegatus (sheepshead minnow): 107090586
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Entry
107090586 CDS
T06110
Name
(RefSeq) zinc finger SWIM domain-containing protein 6-like
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107090586
Cilium and associated proteins [BR:
cvg03037
]
Other cilia and associated proteins
Stereociliary proteins
107090586
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
ZSWIM_N
TPR_ZSWIM8
SWIM
Motif
Other DBs
NCBI-GeneID:
107090586
NCBI-ProteinID:
XP_015239534
Ensembl:
ENSCVAG00000003617
UniProt:
A0A3Q2DQ08
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MMAERVQQPPAKRLCCRPGFGATCRQGHRAAAGALCGGGSAANQGESSRTQSPESLLDIA
ARKVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGAGEEVGSGGES
GDETRLPFRRGIALLESGCVDNVLQVGFHLSGTVRELATSSEPELLCNVSVSFDRCKITS
VTCSCGNKDIFYCAHVVALSLYRVRKPEQVKLRLPISETLFQMNRDQLQKFVQYLITVHH
TDVLPTAQKLADEILSQNSEINQVHGAPDPTAGASVDDENCWHLDEEQVQEQVKLFLSQG
GYHGSGKQLNLLFSKVREMLMMRDSNGARMLTLITEQFMGDPRLALWRQQGTTMTDKYRQ
LWDELGALWMCIVLNPHCKPEQKAAWLRQLRRWNGVDVCPLEDGNHGSELINLTNALPQG
PPGNPDSLTRPHRTVFTRAIEACDLHWQDPHLQHIITEDHYNNYCYHDNLDGSLFDSRGW
PLWHEHVPTACARVDALRSHGYPKEALRLAIAIVNTLRRQQQKQLELFRGHKKELLHRGV
TSVTNLEGWVGHPLDPIGTLYSTLMENGRGSDGRATLDFSGSCRRTENPVYTPFLEEGET
FVLLAVETALIGLGQQRVMPDGLYAQEKVCRNEEQLLAKLQEVELDDTLVKILRKQATLL
LEAGPYSGLGEVVYRESVPMHTFAKYLFTSLLPHDAELAYQIALRAMRLPVLESTAPSAD
LSRPQHIVSVVPNRYPRWFTLSHIESQQCELASTMLTAAKGDACKLHTVLESIQKNIHSS
SHIFKLAQDAFKIATLMDSLPDLTLLKVSLELGLQVMRLTLSTLNWRRREMVRWLVTCAT
EVGVFALDNIMQNWFTLFTPTEATSVVASTIMSNSTIVRLHLDCNQQEKLANSARTLALQ
CAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAASTGMNYTQLFTIARYMEHRGYPMRA
YKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAVIPLVVKSVKCATVLSD
ILRRCTLTTPGMVALHSRRNSGKMMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYS
EFIEFLSKARETFLMAQDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggagcgcgtccagcagcccccggccaagcggctctgctgtagaccgggcttc
ggcgcaacatgtaggcaaggccatcgggccgcggcgggggctctgtgcggcggcggctcg
gctgccaaccagggcgaatcgagccgaacccagagtccggagtctctcctggacatcgcg
gcgaggaaagtcgcggagaagtggccgtttcagagggtggaggagcgtttcgagcggatt
ccggaacccgttcagaggcggatcgtgtactggtcctttcccaggagcgaacgggaaatc
tgcatgtactcgtcgttcaacaccggcgccggagaagaggtcggaagcggcggggagagc
ggcgacgagacgcggctgccgttcagacggggcatcgctctgctggagagcggctgcgtg
gacaacgtcctgcaagtcggttttcacctcagcgggacagtccgggaattggccacatcc
tccgaaccagagctgctgtgcaacgtgagcgtcagcttcgaccgctgcaaaataacctca
gtaacatgcagctgtggcaacaaagacattttctactgcgcccatgtggtggcgctctca
ctgtaccgggtacggaagcccgagcaggtcaaactaaggctgcccatctcagagacttta
ttccaaatgaacagagatcagctgcagaagtttgtccagtacctgatcacagtgcatcac
accgacgtgctgccgacggcgcagaagttggccgatgaaatattgtcgcagaactccgag
atcaaccaggtgcacggagctccagatccgacggcaggggcgagcgttgacgacgagaac
tgttggcatttggatgaagaacaagtccaggaacaggtcaagctctttctctcccagggc
gggtaccatggctcaggaaagcagctcaacttgctgttcagcaaggtgagagagatgctg
atgatgagagactccaacggagctcgtatgttgacgctgatcacagagcagttcatgggt
gaccccagactggcgctatggaggcaacaggggaccaccatgactgacaagtacaggcag
ctatgggacgaactaggggccctttggatgtgcatcgtgctgaaccctcactgcaaaccc
gagcagaaggctgcgtggctccggcagctccgcaggtggaacggtgtggacgtgtgtccc
ttggaggatggtaaccatggcagcgagctgatcaatctgaccaatgctctgccacagggc
cctcctggtaacccagactcgctgactcgacctcaccggacagtcttcacacgagctatc
gaggcctgcgacctgcactggcaggacccccacctgcagcacatcatcacagaggaccac
tataacaactactgttaccacgacaacctcgacggctccctcttcgactccagagggtgg
cccctgtggcacgagcacgtccctacggcgtgcgccagagtggacgccctaaggtcacac
ggttaccccaaagaagctctcaggctggccatcgccatcgtcaacacgctgcggaggcaa
cagcagaagcagctggagcttttccgtggccataaaaaagagctgctccatagaggcgta
acatccgtcaccaacctggagggctgggtgggccaccctctggaccccatcgggactctg
tacagcaccttaatggagaacggacgggggagcgatggcagagcgacgctcgacttctca
ggctcgtgtagaaggacggagaatcccgtttacacgccgttcctggaggaaggagaaacg
tttgtgctgctggccgtagagacggcgctgatcggtttagggcagcagagggtgatgccg
gacggcctctacgcccaggagaaggtgtgtcgcaacgaagagcagctgctggccaagctt
caggaagtcgaactggacgacacgctggtgaagatcctgcggaagcaggccacgttactg
ctggaggctggtccttacagcggtctgggggaagtggtctacagagaaagcgtccccatg
cacacttttgccaagtatcttttcacctccctgctacctcacgacgccgagctggcgtac
caaattgcactgagggccatgaggttgccggtcctggagtccacggccccctctgccgac
ctgtctcgtcctcaacacatagtgtctgtggtgcccaatcgctaccctcgctggttcacc
ctcagccacatagagagccagcagtgcgagctggcctccaccatgctcactgctgctaaa
ggtgatgcctgcaagctccacacagtgttagaatccatccagaagaacatccactcctcc
tctcacatcttcaaactggctcaggatgcctttaagatcgccactctgatggacagcctg
ccggacctcacgctgctcaaagtctccctggagctgggcctccaggtcatgagactgacc
ctgtccacgctgaactggcggaggagagagatggtgcgctggctcgtcacatgtgctact
gaagtcggtgtgtttgctctagacaacatcatgcagaactggttcacgctcttcaccccg
acggaagcgaccagcgtggtggccagcaccattatgtccaatagcaccattgtccgcctt
catctggactgcaatcagcaggaaaagctcgccaactccgcccggaccctggccttgcag
tgtgccatgaaggacccccaaaactgtgcgctctctgccctgacgctatgcgagaaggac
cacatcgctttcgagacggcctaccagatcgtactggacgcggcctctacaggaatgaac
tacactcagctgtttacaatagcacgctacatggagcaccgcggctatcccatgagggcg
tacaaactagcgacgttagccatgacgcaccttaacctcagctacaaccaagacacacac
ccagccatcaacgacgtgctctgggcctgcgccctcagccactcgctgggaaagaacgag
ctggctgctgtcatccccctggtggtgaaaagtgtgaagtgcgccacggtactgtcggac
atcttacggcggtgcacgctgaccacgccgggcatggtggcgcttcacagtcgcaggaac
tcggggaagatgatgtcgctggacaaggctccactcaggcagctgctggacgccaccatc
ggggcctacatcaacaccacgcactctcggctgacgcacatcagcccacgccactacagc
gagttcatcgagttcctcagcaaggccagagagacgttcctgatggcgcaggatggacac
atccaattcacgcagtttatagacaacttgaagcaaatctacaagggcaagaagaagctc
atgatgttagttcgagagagattcggttga
DBGET
integrated database retrieval system
