KEGG   Cyprinodon variegatus (sheepshead minnow): 107090686
Entry
107090686         CDS       T06110                                 
Symbol
larp1
Name
(RefSeq) la-related protein 1
  KO
K18757  la-related protein 1
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107090686 (larp1)
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107090686 (larp1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 107090686
NCBI-ProteinID: XP_015239716
Ensembl: ENSCVAG00000022687
UniProt: A0A3Q2DJK2
LinkDB
Position
Unknown
AA seq 1076 aa
MATQVEALLPGNPLAKAEEHGKVIHGEPVEVAEEEEELQRAKRQRGVADSGAELGGNTGG
EGQSSKRATELQQDEDSSDSGDKLGEGKGSGGRKEFTEAPPPKVNPWTRKMNAVTVVSVN
GQTHTESSGPAKVVRAGIPPKARRGGKVGDFGDTNSWPTPGEIATKDMQGPKRSTAKKET
KEKRESNEESKENLKAKSDDSGEEKNGDDDSQKNGPKKKGNKQKWVPLMIDVKPEGPRER
SASRNNSRQNEHQRLPPNARNDLRDWHSQKYEREWRDDHDEVSSVKSEGAPFRGGFRGRG
RGRGRGRGRGRGGRSHYDYHYGYKSYDPKDGQYGQKYGNSVTYYYDNMSSSELYSVDQDL
LKDYIKRQIEYYFSLDNLERDFFLRRKMDQEGFLPVGLIASFHRVQALTTDVNLILEALK
DSKEVEIIDMKIRRKEDPEKWPLPGLMVPNHTHTDFSQLINCPEFVPRQMTEELRGSSRS
STPVQQQTKTETDMSNLKTMPKGLSASLPDLDSESWIEVKKRPRPSPARPKAPSLQQQKE
KDDLLRSPVPQSGSSPTPVASGNKDGAEQDEPEELDFMFDEEMEQIDGRRNTFTDWSDED
SDCELDDHDVNKILIVTQTPPYLRKHPGGDRTGHHTSRAKLTSEWAKVINDGLFYYEQDL
WEDNYEPEYATIKQEVENFKKVHLISREQFDCLTPEPPVDPNQEVPPGPPRPQQIPTDAL
ANKLFGAPEPSSAARSLPTTVPESPNYRSARTPRTPRTPHRKDPTMTPRFYPVVKESRPV
DAKTPRKRKTRHSSNPPLECHVGWVMDSREHRSRTASVSSNASPSEGTPALSNIGCTPQS
LPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFN
RKMYEEFRQLVVEDGKEGYRYGLECLFRYYSYGLERKFRPDIFKDFQEETMKDYEAGQLY
GLEKFWAFLKYSKAKNLEIDPKLQECLSKFKRLEDFRIDPPMEEGGRRRHPSSGDGRRRH
PSQSSSRPHSQASGAGPAPPTTASGSSSKDVAKPTNQNQKPPAPSAEPAPDAKTLK
NT seq 3231 nt   +upstreamnt  +downstreamnt
atggccactcaggtggaggctcttctgccgggaaaccctcttgccaaggcggaggagcat
ggcaaagtgatccacggcgagccggtggaagtagcagaggaggaggaggagctgcagcgg
gccaagcgacagcgaggtgtcgcggacagcggcgccgaactgggagggaacaccggcggc
gagggacagagctccaaacgggcgacggagctccagcaggacgaggacagcagtgacagc
ggggacaagctaggcgagggtaaaggcagcggggggaggaaggagtttactgaagctccc
ccgcccaaggtgaacccgtggaccaggaaaatgaacgcggtgaccgtggtcagcgtgaac
ggacagacacacaccgagtcgagcggtcctgccaaagtggtcagagcggggattccaccc
aaagcgagacgtggaggaaaggttggagactttggcgacacgaacagctggcccactcca
ggagaaattgcaactaaagacatgcagggccctaaaaggtcaacggctaaaaaggaaact
aaggagaagagggagagcaacgaggagagcaaagaaaacctgaaagccaagtcagacgac
tccggagaggagaagaacggagacgacgactcgcagaaaaatgggcccaagaagaaagga
aacaagcagaagtgggttcctctgatgatcgacgtgaagccagagggtcccagggagcgc
tcggcctccaggaacaacagtagacagaacgaacaccagcgcctgcctcccaacgccagg
aacgacctcagagactggcacagtcaaaagtacgagcgggagtggcgcgatgaccatgac
gaggtgtccagtgtgaagagtgagggggcgccgttccgcggagggttcagaggtcgagga
cgtggaagaggaagggggcgaggacgaggccgaggaggcagaagtcactacgactaccac
tacggctacaagtcgtatgacccgaaggacggacagtacggccagaagtacggcaactct
gtcacctactactacgacaacatgagcagcagcgagctttattctgtggaccaggacctt
ctgaaagactacatcaagagacagatagagtactacttcagcctggataacctggagcgg
gacttcttcctacggaggaagatggaccaggaaggtttcctgccggttggactcatcgcc
agtttccacagagttcaggccctcaccacagatgtcaacctgatcctggaggctttaaag
gacagtaaagaagtggagattatcgacatgaagatccgtcggaaggaggatcctgaaaag
tggcctcttccaggcctgatggtgccgaaccacacacacacagacttctcacagctcatc
aactgtcctgagtttgttcccaggcagatgactgaggagctcagaggatcctccaggtcc
tccaccccggtgcagcaacagaccaagactgaaacagacatgtcaaacctcaaaacaatg
ccaaagggcctctctgccagtctgcccgacttggactctgagtcctggatcgaggtgaag
aagaggcccagaccttcgcctgccaggccaaaggccccttcgttgcagcaacagaaagaa
aaagacgatttgctgcgctctccggttccccagtctggctcttcgcccacccctgttgcc
tcaggaaataaggatggggcggagcaggacgaacccgaggagctggacttcatgttcgac
gaggagatggagcagatagacggacgccgcaacaccttcaccgactggtcggacgaggac
tcggactgcgagctcgacgaccacgacgtcaacaagatcctgatcgtgacgcagacgccg
ccctacctgcggaaacacccagggggcgaccgcacagggcaccacacgtcacgcgccaag
ctgaccagcgagtgggctaaggtcatcaacgatggactcttctactacgagcaggaccta
tgggaagacaattacgaaccggagtacgccaccatcaagcaagaggtggagaacttcaag
aaggtccacctgatcagccgtgaacagttcgactgcctgacacctgaaccccctgttgac
cccaaccaggaagtccccccaggtcccccccgcccacagcaaatccccacagacgcttta
gcaaacaaactctttggtgctccagagccgtcctctgcagcccgctctctccccaccacc
gtgcctgagtctccaaactaccgcagtgcccggacgccccgcacgcctcgcaccccccac
cgcaaggacccgaccatgaccccacggttctacccagtggtgaaggagagtcgtcccgtt
gatgcaaagacaccaaggaagaggaagactcggcacagctccaatccgcctttggagtgt
cacgtgggctgggtgatggactccagagaacatcgctcccgcaccgcctctgtcagctcc
aacgccagtccttctgaaggcacccctgccctgagcaacatcggctgcacgcctcagtcc
ctccccaagttccagcacccgtcacacgagctgctgaaggagaacggcttcacgcaacat
gtttaccacaagtaccgccggcgctgcctcaacgagaggaagcggctcggaattggccag
tcacaggagatgaacacgctcttccgtttctggtcgttcttcctgcgggatcatttcaac
agaaagatgtacgaggagttcaggcagctggtggtggaggacggcaaagagggctacagg
tacggtttggaatgcttgttccggtactacagctacggcctggagaggaagttcagaccg
gacatctttaaggacttccaggaggaaaccatgaaggattacgaagcaggtcagctctat
ggactggagaagttctgggccttcctcaaatactccaaagccaagaacttggagatcgac
cccaaactgcaggagtgtctgagcaagttcaagcgtctggaggacttcaggatcgatccg
ccgatggaggagggaggacgtaggagacacccgtccagcggggacggccggcgccgccat
ccctctcagtcctcgagtcggccccacagccaggcgagcggcgccggtccggcccctcct
actactgcttcaggttcttcgtctaaggacgttgccaaacccaccaaccagaaccagaaa
ccccccgctccctctgcagaacccgcaccagacgccaaaacactgaagtaa

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