Cyprinodon variegatus (sheepshead minnow): 107090691
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Entry
107090691 CDS
T06110
Symbol
sec24a
Name
(RefSeq) protein transport protein Sec24A
KO
K14007
protein transport protein SEC24
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107090691 (sec24a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107090691 (sec24a)
Membrane trafficking [BR:
cvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107090691 (sec24a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
107090691
NCBI-ProteinID:
XP_015239725
Ensembl:
ENSCVAG00000022938
UniProt:
A0A3Q2DK76
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MSTAGFNSQNGTGTAQTYTNGPSQNPVALQQPPGLGYGMNHQPAYHPMQAKGPVPPGPGI
HTFGQYQPTPPVSSYQPGPQLSSYPSAPGQPMLSRPQMGGHPPNTPPQSASPVPRFPPAQ
ATPPPPSTSYYSNPPQPVAPAWQYNAAPPAMGPASPLSTPPRGPVPNHVNPAASLAAPLP
PASAPFSSAPPPHLSHSAAQPSGPGAPPTSIHGYPQPGSAPPPMNPLAPHTYQPNRPAYG
PPPTGPPPAMKATPPPTGPPVTSGTPPPPKADAQCWDAGNSALSPTEPDFQEGDVECPGN
VAGNGPQAPNSYNQVDNRMAGPTQPGPPGRHLGHYPSLPPGYQNTSAPPGASGFHPSVQA
AQQPYTQGPQPYQQPPGGPGPAQLSPSLAAMSLQSNTPEALRVVNLLQDRNLLPPTPVPA
PTPCLTQDLQKLNCSPEVFRCTLTSIPQTQSLLNKAKLPLGLQLHPFKDLSQLPVVTSST
IVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFMYNPVSRSYGEPHKRPEVQNAT
IEFIAPSEYMLRPPQPAVYLFVLDVSHNAVETGYLNVFCQSMLENINALPGDSRTKVGFI
TFDSTIHFYNLQEGLSQPQMLIVSDIEDIFLPTPDSLLVNLNESKELVQDLLKSLPNLFE
KTMETQSALGAALQAAFKLLSPTGGRMSVFQTQLPNLGAGALQSREDPNQRASAKDVQHL
SPATDFYKKLALDCSGQQVAVDLFLLSAQYCDLASLGCISRYSAGSVYYYPSYHHQHNPA
QVERFQRDLKRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGFA
VQMSIEENLDDMQVVSFQAALLYTSSKGERRIRVHTMCLPVVNSLSDVFAGADVQAITGL
LACMAVDRSVTASLSDARDAMTNAAIDSLSSYRQSVLTIQQPGLLAPACLRLFPLYILAL
LKQKAFRTGTSTRLDDRVFAMYQLKYQPLAFAMLMIHPSLYRVDDLSDEGALNVNDRTIP
QPRVLQLSVEKLSREGAFLMDAGLVMYLWIGRNCQPNFLSQVLGVPNYSAVPEKMDILPE
LDTAESQRTRAFIGWLRDQRPFFPSLHIIRDESQLKPIFMQNMIEDRTESALSYYEFLLH
LQQQISK
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgccgggttcaactcccagaatggaactgggacggcacagacctacacgaat
ggtccatcacagaatccagtcgctctgcagcagccgccagggttgggatatggcatgaac
catcagccagcctatcatccaatgcaggccaaaggtcctgtaccccctggtcctggcatt
cacacctttggacagtatcagcccactccccctgttagttcttatcagcctggcccacag
ctcagttcctatccctctgctccaggacagccaatgttgtctaggcctcaaatgggaggt
cacccacccaacacccctcctcagtctgccagccctgttcccaggtttcctccggcacag
gcaacaccacctcctccttctaccagctactactcaaaccctccacagccagtggctcct
gcatggcagtataatgcagctcctccagccatggggccagcctcccctctgagcacacct
cccaggggccctgttcccaatcatgtgaatccagctgcaagcttggctgcaccgttgcca
ccggcgtcggctcctttcagctctgccccaccgccccacttgtcccatagtgccgcccag
ccctcaggtccaggagccccccccacttctatacacggataccctcagccaggctctgct
cctccaccaatgaacccgctggccccgcacacataccagcctaacagacctgcatatggt
cctccaccaacaggacccccaccggccatgaaagccacgccaccccccactggaccccca
gtaaccagtggcacgcctcctcctcccaaagcagatgctcagtgctgggacgctggcaac
agcgctctttctcccactgagcccgacttccaggaaggagatgttgaatgtccaggaaat
gtggcagggaatggcccacaggcaccaaacagctataatcaggttgacaacagaatggct
ggtccgactcagcctggcccacctggtcgacacttgggtcactacccctccctccctcct
gggtaccagaacacctcagctccccctggcgcctccggctttcatccgtcagttcaagct
gcccagcagccttatactcaaggacctcagccataccaacagcctcctggtggtccaggt
ccagcccagctgagcccatcactagcagccatgagcctccagtcaaacacacctgaggct
ctgagggtggtcaaccttttgcaggatagaaacctgctgcccccaaccccagttcctgcc
cccacaccctgcctcacccaggacctgcagaaactcaactgcagcccagaggtcttccgt
tgtacgctgacaagcatccctcagactcagtctttgctcaataaggctaaattaccattg
ggtctgcagctccacccctttaaagacctctcgcagcttcctgtggtgacatccagcacc
atagtcaggtgtcggtcgtgcagaacctatatcaacccctttgtctccttcctggaccag
aggagatggaagtgtaacttgtgttatcgagtaaatgacgtcccagaagagtttatgtat
aacccagtcagcagatcctacggcgaaccacacaaaagaccagaagtccagaatgccact
attgagttcatcgctccttcagaatacatgctgagaccaccacagcccgctgtttacctg
ttcgtcctggacgtttctcacaacgccgtggagacgggttacctgaacgtcttctgtcag
tctatgctggaaaacatcaatgcgcttcctggagactcgcggacaaaggttggttttatc
accttcgacagcaccatccacttctacaacctccaggagggactttcacaaccacagatg
ctcattgtttctgacatcgaagatatctttctaccaacaccagacagccttctagtaaac
ctcaatgaaagcaaggagcttgtgcaggatctactgaagagcctgccaaatttattcgag
aagacgatggagacccagtctgctctgggtgctgctctgcaagcagcctttaagttgttg
tctccaaccggagggcggatgtccgtcttccagacccagctccccaacctgggtgctggg
gccctgcagtccagagaggatcccaaccagcgagcttctgccaaggatgtccagcactta
tccccagcaacagatttctataagaagctggccctggactgctctggccagcaggtcgcg
gtcgacctgtttctgctcagcgctcagtactgcgacctggcctcgctcggatgcatatcc
aggtattcggcaggaagcgtttattactacccctcctatcaccatcagcataacccagct
caggtggagcgcttccagagagatctgaagagatatttaacacggaaaatcggctttgag
gcagtcatgagaatacgttgcaccaaaggtttgtccatccacacgttccatggaaacttc
tttgtgcgttccacggatctgttgtccctccccaacgtcaacccggatgctggcttcgct
gttcagatgtccatcgaggaaaacctggatgacatgcaggtggtttccttccaggctgct
ttgctttacacctccagcaaaggggaaagaaggatcagagtgcacaccatgtgcctccct
gttgtaaattctctgtcggatgtcttcgctggagctgatgttcaggccatcactggactg
ctggcctgtatggctgtggaccgctcagtgacggctagtctgagtgacgccagagacgcg
atgaccaacgctgccatcgactcgctttcttcataccgacagtctgtgctgaccatccag
cagccgggcttgttggctccagcctgcctccgactcttcccgctctacatcttggctctg
ctcaaacagaaagccttcaggacaggaaccagtaccagacttgatgaccgtgtgtttgcc
atgtaccagctgaagtaccagccgttggcctttgccatgttgatgatccatccttctctg
tatcgtgtcgacgacctgagcgatgagggagccctaaacgtgaacgaccggaccatcccg
cagcccagagtcctacagctgtcagtggagaagctcagcagggagggagccttcctcatg
gatgctggacttgtgatgtacctttggatcggacgcaactgccagcctaacttcctctca
caggtcctgggggttccaaactactctgctgtgcctgagaaaatggatatcctcccagag
ctggacactgcagagtcacagagaaccagagctttcattggctggctcagggatcagagg
ccgttcttcccctccctccacatcatcagggatgagagccagctgaaacccatctttatg
cagaacatgattgaagaccgaacggagtcggcgctgtcatactatgagttccttctccac
ctccaacagcaaatctccaaataa
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