KEGG   Cyprinodon variegatus (sheepshead minnow): 107090727
Entry
107090727         CDS       T06110                                 
Name
(RefSeq) lysine-specific demethylase 5B-B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cvg01009]
    107090727
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cvg03036]
    107090727
Enzymes [BR:cvg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     107090727
Protein phosphatases and associated proteins [BR:cvg01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107090727
Chromosome and associated proteins [BR:cvg03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107090727
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 PHDvar_NSD PHD_4
Other DBs
NCBI-GeneID: 107090727
NCBI-ProteinID: XP_015239764
Ensembl: ENSCVAG00000020879
UniProt: A0A3Q2DF37
LinkDB
Position
Unknown
AA seq 1548 aa
MSLPRPDEFKPPPECPVFEPSWEEFRDPYAFINKIRPIAEKTGICKVRPPPDWQPPFACD
VDKLHFVPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCTLKIPHVERKILDLYKLNKLV
ADEGGFDIVCQDRRWTKIAVQMGFSPGKAVGSHLRGHYERILYPYNLFQSGANLLAQETA
SKLMRLEADPDHEKCVQKTDQPAEDKDSSEPKLQEQIQRPPAPTPDASPSARRAKRMKIE
TTCVKTEPGEMGDSKPNLRRRMGSIVVKQEPGFLPPAEKPIPILVKQEPVEFKEPIMEAD
KFKSRYKKMIPLVPPSPVDLVVCLVCGSGGDEDRLLLCDGCDDSYHTFCLIPPLHDVPKG
DWRCPKCLAQECSKPHEAFGFEQAHRDYSLRAFGQMADAFKSDYFNMPVHMVPMELVEKE
FWRLVGAIEEDVTVEYGADIASKEFGSGFPIPNGKFKVSPADEKYLKCGWNLNNLAMMNP
SVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQ
LEKVMKKLAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRAYHSG
FNQGFNFAEAVNFCTVDWMPLGRQCVDHYRLLHRYNVFSHDEMVCNMATKAGTLNVVLAS
AVHKDMALMIKEEQELRDKVKKMGVVNCKEAKYDNLQDDERQCATCRTTCYLSAITCPCS
PGVLVCLYHINNLCSCPVSNYVLNYRYTMDDLFPMMNAVKQRAELYDEWAFRVTATLEAR
LEKKKGLPVFRSLLAESESRLFPDNDLLRRLRLVTQDAEKCASVAQQLLNGKKQTRYRCG
SGRSRSQLTVEELSSFVRQLYNLCCSLPQAPQLKELLNRIEDFQQHSEKVLAEESPSVAE
IQSLLDVSFDFDVDLPELPLLRERLEQARWLEAVQEASSQPATLTLEAMRRLIDQGVGLA
PHQSVEKAMARLQEQLTLSEHWEDKASSLLQARPPHSIETLSAAAEKASVIPAHLPNCLL
LKDTIRKAQEWLQEAEELQVSGCVMTADSLSDMVLRGQAIQVQLEPLERLESLLANAQEW
KESAAATFLLKDSSLTLLEVLCPSFEVGTLSTSKRKAKKGKEYPKNNKKKPARLNSLREV
EKALSESTDSTSAMATLEELRVREMETFFNLRAANESKLLPTADCMDLKVCFCQKAPMGA
MLQCELCRDAFHSVCVRDPSDSFETQPWLCPHCQRSEKPPLSKVFSLLTSLRSVGVRLPE
GDALNYLVDRTLNWQQRAQQILTDCHLPELEERPETPPTLTHWVSGCDNTHTNTQAPCLT
PEWNRTSHAQTVFYTEQRCIPLQGLNSELEELMVEGLLLQVSLPQVHSLYHILLDRANSQ
HPNRPASPPEEEPSDQGKHMQFISQGTNMALNQDGSTSTRDTMTPSERKAKRRLERGGLP
DAEPRGRDKKHSHKRQKVNKKKPQRRPASTSSSPRSDFSQSDDSDEEMAVCPAESCLLPE
GDEVDWVQCDGRCNQWFHQVCVGVTPEMAEKEDYVCVSCTLNDRQIRK
NT seq 4647 nt   +upstreamnt  +downstreamnt
atgagcctgcctcggccggacgagttcaagcctcctcccgagtgcccggtcttcgagccc
agctgggaagaatttcgagatccttatgcttttatcaacaagatcagacccatcgcagaa
aagaccgggatctgcaaagtccggcccccgccggactggcagccaccatttgcctgcgat
gttgacaagcttcactttgttcctcggatccagcggctcaatgagctggaggcacagacg
agggtcaagctcaactttttggaccagattgccaaattttgggatttgcagggatgtacc
ctgaagatccctcatgtggagcggaaaattttagacttatataaactaaacaagctcgtt
gcagacgagggtggatttgacatcgtctgccaggacaggcgttggacaaagattgcagtt
caaatgggtttctctcctggcaaagctgtgggctcccacctgcgagggcattacgagaga
atcctctatccctacaatctgtttcagagcggagctaacctgctggcacaagaaacagct
tccaaactgatgcgtttggaggctgatcctgatcatgaaaagtgtgttcaaaagaccgac
cagccagcagaagacaaagatagcagcgagcccaagctgcaggagcagatccagaggccg
ccggctcccactcctgatgccagccccagtgctcgcagagccaagcgcatgaagatcgag
acgacctgtgtaaagactgagccaggtgagatgggtgatagcaagcccaatctgaggagg
aggatgggctctattgttgtcaagcaagaaccaggtttcctaccgcctgcagaaaaaccc
atcccaattctagtgaaacaggaaccggttgagtttaaggaaccaataatggaagcagac
aaattcaagtctcgctacaagaagatgattcctctcgttcctccaagtccagtggatctg
gtagtgtgtctggtgtgtggcagcggaggcgacgaggaccggctgctgctgtgtgacggc
tgtgacgacagctaccacaccttctgtctgatcccgccgctgcacgacgtccctaaagga
gactggaggtgccccaagtgtctggctcaggaatgcagcaaaccgcacgaggcgttcggg
tttgaacaggcacacagggactattctctgcgtgcattcgggcaaatggcagacgctttc
aaatccgactacttcaacatgccggttcacatggtacccatggagctggtagagaaggag
ttttggcgcctggttggagccattgaggaggatgttactgtagagtatggagctgatatt
gcctcgaaggagtttgggagtggattccccatccccaatggaaaatttaaggtttcccca
gcagatgagaaatacctcaaatgtggctggaatctgaacaatctggcaatgatgaatcca
tcagttctgactcatgtgacagctgacatctgtgggatgacgctgccctggctttacgtc
ggcatgtgcttttcctccttctgctggcacatcgaggatcactggagctactccatcaac
tacttgcactggggggaacctaagacctggtatggcgctcctggttttgctgccgagcag
ctggagaaggttatgaagaagctggctccagagctgtttgactctcagcctgatctcctg
caccagctggtcaccatcatgaaccccaacacactgatggcacacggagtcccgatttac
aggactaaccagtgcgctggtgagtttgtcatcacgtttcccagagcttatcacagcggc
tttaatcagggctttaactttgccgaggccgtcaacttctgcactgtggactggatgccc
ctcggcaggcagtgtgtggaccactaccgtctgctgcatcggtacaacgtcttttcccac
gatgagatggtgtgcaatatggccactaaagcaggcacacttaatgtggtattggcctca
gccgtccacaaggacatggccctcatgatcaaagaagagcaggaactaagggacaaagtc
aagaaaatgggtgtggtgaattgcaaggaggcaaaatatgataatctccaagatgatgag
cggcagtgcgccacatgcaggaccacctgctacctctctgccatcacctgcccctgtagc
ccaggagtcctggtctgtctgtaccacatcaacaacctctgctcctgccctgtctccaat
tacgttctcaactacagatacaccatggatgacctgttccccatgatgaacgccgtgaag
cagcgagctgagctctatgatgaatgggcttttcgtgtgacagcgaccctggaggctagg
ctagaaaagaaaaaaggcctgcctgtctttcgctcccttctcgctgagtcagagtccagg
ttgttccctgacaacgacctgctgcggcggctgcgtctggtcacacaagatgcagagaag
tgcgcctcagtggctcagcagctactgaatggcaaaaagcagaccaggtatcgatgtgga
agtggaaggtcccgcagccagttaacagtggaagagctcagctcgtttgtgaggcagctg
tacaacctctgctgcagcctccctcaggcgcctcagctgaaggaactgttgaatcggatt
gaagacttccagcagcacagcgagaaagtcttagcagaggaatcccccagtgttgcagag
atccagagccttctagacgtcagctttgatttcgatgtagacctgccagaactgccgcta
ctgagggagaggctggagcaggcaaggtggctggaggcggtgcaggaggccagctcccag
cctgccacactcaccttagaggccatgaggagactcatcgaccagggagtcgggttggca
cctcatcagtccgtggagaaagctatggcacgcctccaagagcagctcactttgtcggag
cactgggaggataaggcgagcagcctgctgcaggccagacccccccactcaatagaaaca
cttagcgctgctgctgaaaaggcctcagtaatccccgctcatctcccaaactgtctgctc
ctgaaagacaccatcaggaaagcccaggagtggcttcaagaagcagaggagctccaggtg
agtggatgtgtgatgacggcagacagcctgtctgacatggtgctacgaggacaggccatc
caggtgcagctggagcccttagagaggctggagtctttgttggcaaacgcgcaggagtgg
aaagaatctgcagcagcaacgttccttttaaaggactcatctcttactctgctagaggtc
ctgtgtccaagctttgaagtcggaactctcagtacctcgaagaggaaggccaagaagggg
aaagaatacccgaaaaataacaaaaagaaacctgcacggcttaactctctccgtgaggtg
gaaaaagctctttcagagagcacggactctacatctgctatggcgactctggaggagctg
cgtgtcagggagatggagaccttctttaatctcagggcagcgaatgagtcaaagctcctt
cccacggcggactgcatggacctgaaggtgtgtttctgccagaaggcgcccatgggagca
atgctgcagtgtgagctctgcagggacgccttccacagcgtctgcgtcagggacccatcc
gacagctttgaaacgcagccgtggctctgtccacactgccagcggtcagagaagcccccg
ctaagcaaagtcttctctctgctgacgtctctgcgaagcgtaggcgtccgtctgccagag
ggcgacgctctgaactatctggtagataggacacttaactggcagcagcgagcacagcag
attttaacagattgtcacctgccggagttagaagagagaccagaaacccctccaacacta
acccactgggtgtcaggctgcgacaacactcataccaacactcaggctccgtgtttgact
ccagagtggaacaggacaagccatgctcagaccgtcttttacactgagcagagatgcatc
ccactgcagggcttgaacagcgagctggaggagctgatggtggaggggctcctacttcag
gtgtctttgccgcaggtccacagcctctaccatattttactggacagagccaacagccag
caccccaaccgaccggcgtcacctccagaggaggagccctcagaccaaggaaaacacatg
cagttcatctctcagggaacaaatatggcactgaaccaggatggaagcaccagcaccagg
gacaccatgaccccctcagaaaggaaagcaaagaggcgtctggagaggggaggattaccg
gacgcagagcccaggggaagagataaaaaacactctcacaaaagacaaaaggtgaataaa
aagaagccccagcgccgaccagcttctacctcatcctccccgcgctctgacttctcccag
tctgatgactctgatgaggaaatggctgtgtgtcctgctgaaagctgtctgctgccagaa
ggagatgaggtggactgggtccagtgtgacggcagatgcaaccagtggtttcaccaagtc
tgtgtcggcgtcacgccagagatggccgagaaggaggactacgtttgtgtgtcatgcacg
ctgaacgatcgacagatcagaaagtga

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