Cyprinodon variegatus (sheepshead minnow): 107090744
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Entry
107090744 CDS
T06110
Symbol
poll
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03410
Base excision repair
cvg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107090744 (poll)
03450 Non-homologous end-joining
107090744 (poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107090744 (poll)
Enzymes [BR:
cvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107090744 (poll)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107090744 (poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
107090744 (poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT_2
BRCT
RTT107_BRCT_5
PTCB-BRCT
LIG3_BRCT
NTP_transf_2
DUF1179
Motif
Other DBs
NCBI-GeneID:
107090744
NCBI-ProteinID:
XP_015239789
Ensembl:
ENSCVAG00000018729
UniProt:
A0A3Q2ED81
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MEPRHGIMKAFPKVKRAKVLQGKDVPPLKKKADELDITGNVFDGVTVYLLPAGIGNARCE
IFHRQIRQNGGQIKSSMSPCVTHVVVDDSMDSARALRLLKVDSLPSGVHLLKCTWLSLCI
SEKKLLDEENYSLLLPKRDSESQQESPQKQPGSIEQPPETTAEPESHLAKQEETIDPTIQ
EAKDEAHKEEDGVSQNDLEALISGRNPIEETPKAGANCAPDADAQKPISGKWVCAQSSQS
KSNNFNKHITDKLEVLSKAYTHQGDKWRALGYSKAVNALKSYHKPVTSYQEACQIPGIGK
RMADKIEEIMESGHLRKLDYIGEAVPVLELFTNIWGAGAKTAQLWYQQGFRSLEDIQTKA
HLSHTQKIGLKHYDDFLDRMPREEAAAIEKVVRDAAHTVDANLVAMACGSYRRGKATCGD
VDVLISHPDGISHRGVFSKVLQILHGSGFLTDDLVSHEENGEQKKYMGVCRLPGPGRRHR
RLDIIVVPYDEFACSLMYFTGSAHFNRSMRALAKTKNMSLSEHSLNKDVVRQGSLKVHGG
TPLPTPTEKDVFSLLGIPYRPPQERDW
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgtcatgggatcatgaaagcttttccaaaggttaaacgggctaaagttctg
caggggaaggatgttcctccactaaagaagaaagcagatgaacttgacatcacaggaaac
gtcttcgatggagtcacagtgtaccttctgcctgctggaataggaaacgccagatgtgag
atcttccacagacagatccggcaaaatggaggacaaatcaagagttcaatgtccccctgt
gtcactcatgtggtcgttgatgactccatggacagtgccagggctctgcgcctgctgaag
gtggatagtctgccctctggtgtccatctgctgaaatgtacatggttaagcttgtgtatc
agtgagaagaaactcctggatgaagagaactacagcctacttttacccaaaagggattct
gaatcacagcaggaaagtccacaaaaacaaccgggaagcattgaacaacctcctgaaaca
accgcagagccagaaagtcatttggccaagcaagaggagaccatagacccgacaatccaa
gaagccaaagatgaagcccacaaagaagaagatggcgtctctcagaacgacctggaagct
ctcatctccggtcggaaccctatagaggagactcccaaagccggtgcaaactgcgctcca
gatgctgatgctcagaaacccatatcaggaaagtgggtctgtgctcagtcttctcagtcc
aaaagtaataacttcaacaagcacatcacagacaagctggaagtcctgtccaaggcctac
actcaccaaggagacaagtggagagcattgggctactctaaggcggtcaacgcactgaag
agctatcacaagcctgtgacatcatatcaggaagcctgtcagatcccaggaataggaaaa
cgcatggcggacaaaatagaagaaataatggagagtggtcacctgaggaagctggattac
atcggagaggctgtgcctgtcttggagcttttcaccaacatctggggagcaggagcaaag
actgcacaactttggtaccaacagggctttcgcagcctggaggatatccaaacaaaagcc
cacctgagccacactcagaaaatcggacttaagcactacgatgactttctagaccgaatg
cctagagaagaggcggcagcgatagagaaagtggtgagggatgctgcgcacactgttgat
gccaacctcgtggccatggcatgtggctcctaccgccgtgggaaggcaacgtgtggagat
gtggatgtgctcatttctcaccctgacggcatttcccatagaggagttttcagcaaagtt
ttacagattctgcatggcagtgggtttctaacagatgacctggtgagccacgaggagaac
ggagagcagaagaaatacatgggggtgtgccgtttgccggggcccggccgccgccaccgc
aggctggacatcatcgtggtgccatacgacgagtttgcttgctcgctcatgtatttcact
ggctcggcccacttcaaccgctcaatgagagcactggcaaagaccaaaaacatgagcttg
tcagagcactccctgaacaaggatgtggtacgtcaaggcagcttgaaggtacacggcggt
accccgcttcccacgccgacagagaaggatgtctttagtcttttagggataccatacaga
ccaccgcaagaaagggactggtaa
DBGET
integrated database retrieval system
