Cyprinodon variegatus (sheepshead minnow): 107090816
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Entry
107090816 CDS
T06110
Name
(RefSeq) spermatogenesis-associated protein 13-like
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107090816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107090816
Membrane trafficking [BR:
cvg04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107090816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
DUF1604
Motif
Other DBs
NCBI-GeneID:
107090816
NCBI-ProteinID:
XP_015239893
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MRRKSPCPGLASPQDDLQGITFPNGTPSIQRTSSVSSVDLRGRRSQMKNKGPMVKLIGSM
TDLTGRRSKSLSTSPTSPSPMSPLSRLHDDYSRRLPCLQASERQRRPTAATAQVTSAKST
PLIHTEPEHHAEPQPCQTVIDPLSSEPRDSPEQLQADISAQHELPPDSTTSNSEQMVECV
SPPLSQGEASQQQPDFASLPNEVKSQFQEQEALLQTDEVSTAASSPPPDPPARLSNIPTS
PTEEAATSTETSSVQTRRRSGRPRPRPISDYAQLVSRKQSIPEEVPVPNYPERTLEARLH
ENGSSPENYAFNGDVPRHRPISVIGAVDLFPADKEMKEDSLPPPLSRPPIPSHKVPPYRG
VSARFRPCPLSQSTPIGLDRVGRRKLHRVLSAGVSESTATLDDSVSEEEESSFDELADGT
PYLQPGVELSLLNEWISSGHGVYAEALWDHVTMEEKELAFKAGDVIRLLDASHKDWWWGR
GGDREAWFPSSFVRVRVNQEDSSTESVESVADQEDPAPRDKPSTQHREQMRTNVVQEIMK
TERIYIKHLKDICEGYIRQCRKHPDMFTEVQLRTIFSNIEDIYKFQRQFLRELEKKYNKE
EPHLSEIGSCFLMQGEGFSIYSEYCNTHPAACAELQRLMKMGKYKHFFEACRLLQQMIDI
SIAGFLLTPVQKICKYPLQLGELLKYTPKDHRDHTGVSEAYEAMKKVASLINERKRRLES
IDTIAHWQVAILHWEGPDVLERSSELIHSGELTRAVRQGKLQQRSFFLFDHQLVYCKKDV
LRRDLLHYRGRLDMDEIEVLDIADGRDSDLGLTLKNALRLRNASTLEFVCALCCRKVEDK
QRWLQAFAKERQRVKEDQEMGIDISDEQRKQAIINARRPKHGKIKTVGYADSVPPHQNLP
PLQQRHITIPTSVPQQQVFSLAEPPRRKPYHLLYSITRNTFFKK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtaaaagcccatgtccaggacttgcttcacctcaggacgaccttcagggcatc
acatttccaaacgggacacccagcatccaaaggacctccagcgtatcttcggtggacctc
cgaggcaggaggagccaaatgaagaacaaggggccaatggtcaagctgatcggcagtatg
accgacctaaccggccggcggagtaagagtctgtccacgagtcccacctctccgtctccc
atgtcccccctgagccgtctccacgatgactactctcgacgcctgccttgcctgcaagcc
agtgagcgacagcgccggcccacagccgccaccgctcaggtcacctccgccaaaagcact
cctctcattcacactgagcccgaacaccacgcagagccgcagccctgtcagactgtcatc
gacccactttcctcagagccccgagattcaccagagcagcttcaagctgatatctctgct
cagcatgagctgccgcctgattcaacaacaagtaattctgaacagatggtcgaatgtgtt
tcacccccactcagtcagggagaagcatcgcaacaacaacctgactttgcctcgctgcca
aatgaggtaaaatcacaatttcaagaacaagaagcacttctgcaaacagacgaagtctcc
acagcagccagcagcccacctcctgaccccccagcacgcctctctaatatacccacatca
cccacagaggaggctgcaacttccacagagacgtcttcggtccaaaccagacgaaggagc
ggccgccccagaccccggcccatctctgactatgcccagctggtttccaggaagcaatcc
atcccagaggaagttccggtgccaaactatccagaaaggacattggaggcacggctgcat
gaaaacgggagcagccctgagaattatgcctttaacggggatgttccgagacatcggccc
atctctgtgatcggagctgtggatctcttccctgcagataaggagatgaaggaggattcc
cttcctcctcctttgtcacgaccaccgatcccctcccacaaggtgcccccctacagagga
gtgtctgccagattccgaccctgccctctatcccagagcacccctatcggactggaccgc
gtggggcggcgcaagctccacagagtactgagcgctggtgtgtctgaaagcacagctacg
cttgatgacagcgtgagcgaggaggaggagagcagcttcgatgagctcgccgatggcacg
ccctacctccagcctggggtggagctctcattgctcaacgagtggataagctcagggcat
ggcgtgtacgccgaggctctctgggaccatgtgaccatggaagagaaggagctggccttc
aaggccggagatgttatccgcctcctggacgcttcccacaaggactggtggtggggcagg
gggggtgacagggaggcctggttcccttccagctttgtgagggtgcgtgtaaaccaagag
gactcgagcactgagagcgtggagagtgtggcagaccaggaggatccagctcccagggac
aaacccagcactcagcacagggagcaaatgagaaccaatgtggttcaagaaatcatgaaa
accgaacgcatttacatcaaacacttaaaagacatctgtgagggttacatccgtcagtgc
cgaaaacaccccgacatgttcacagaggtgcagctgagaacgatcttcagcaacatagaa
gacatctacaaattccagaggcagttcctcagagaactggagaagaagtacaacaaagaa
gaaccacatctgagtgaaataggctcctgtttcctcatgcagggtgagggcttttcaatc
tactcggagtactgcaacacgcatcccgctgcctgtgctgagctgcagcgtctcatgaag
atggggaaatacaaacatttctttgaggcctgccgcctcctccagcagatgatcgacatc
tccatcgctggctttttgcttacacctgtccagaagatctgtaaataccctcttcagctg
ggagagctgcttaaatacacacctaaagaccacagggaccacactggtgtcagtgaagca
tacgaggctatgaagaaggtggccagtttaattaatgagaggaagaggcggctggagagc
atcgacaccattgctcactggcaggttgccattttgcactgggaggggcccgacgtgctg
gagcgcagttcggagctgatccattctggcgagctgacccgagccgttcggcagggcaag
ctgcagcagcgaagcttcttccttttcgaccaccagcttgtctactgcaaaaaggacgtc
ctgcgaagagacctactccactatcgagggcgtctagatatggatgagatcgaagtgttg
gacattgctgacgggcgggactcggacctgggcctcactctgaaaaatgctctgcggctg
cggaacgcctccaccctggagtttgtgtgcgcactttgctgcaggaaggtggaggacaag
cagaggtggttacaggcctttgccaaggagagacagagagtgaaggaggaccaggagatg
ggaatagacatcagcgatgaacaaagaaaacaggccatcattaatgcaagaagaccaaaa
catggaaagatcaaaaccgttggttatgccgactctgtcccgccacaccagaacctgccg
ccccttcagcagcgccacatcaccattcccaccagcgtgcctcagcagcaggtgttttcc
cttgctgagccccccaggagaaagccttaccacctgctgtacagcatcacccggaacacc
ttcttcaagaaatga
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